RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ZBTB16Q05516 673 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 NR1H3Q13133 447 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 ABTB1Q969K4 478 aaPredicted RBP17.18■□□□□ 0.34
LINC00554-201ENST00000564841 SMC6Q96SB8 1091 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 RBM15Q96T37 977 aaKnown RBP eCLIP17.18■□□□□ 0.34
LINC00554-201ENST00000564841 C2CD2LO14523 706 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 MEIS2O14770 477 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 HARSP12081 509 aaKnown RBP17.18■□□□□ 0.34
LINC00554-201ENST00000564841 DLG4P78352 724 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 C11orf63Q6NUN7 778 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 CEP128Q6ZU80 1094 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 MYCT1Q8N699 235 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 MKL1Q969V6 931 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 MPP4Q96JB8 637 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 FNBP1Q96RU3 617 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 GMLQ99445 158 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 METTL14Q9HCE5 456 aaKnown RBP17.18■□□□□ 0.34
LINC00554-201ENST00000564841 SAYSD1Q9NPB0 183 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 TYW1Q9NV66 732 aaKnown RBP17.18■□□□□ 0.34
LINC00554-201ENST00000564841 MAGEB3O15480 346 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 PGM3O95394 542 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 ZSCAN5DPP0CG00 497 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 PGM1P36871 562 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 MAGEA4P43358 317 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 STAT2P52630 851 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 SPATA24Q86W54 205 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 RBM12BQ8IXT5 1001 aaKnown RBP17.18■□□□□ 0.34
LINC00554-201ENST00000564841 ZNF564Q8TBZ8 553 aaPredicted RBP17.18■□□□□ 0.34
LINC00554-201ENST00000564841 DTNBP1Q96EV8 351 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 PCIF1Q9H4Z3 704 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 MYOZ2Q9NPC6 264 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 APEX2Q9UBZ4 518 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 PPM1HQ9ULR3 514 aa17.18■□□□□ 0.34
LINC00554-201ENST00000564841 MUTP22033 750 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 FUT4P22083 530 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.17■□□□□ 0.34
LINC00554-201ENST00000564841 FAM182AQ5T1J6 154 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 PCNX4Q63HM2 1172 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 NSL1Q96IY1 281 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 DDX18Q9NVP1 670 aaKnown RBP17.17■□□□□ 0.34
LINC00554-201ENST00000564841 FOCADQ5VW36 1801 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 PLS3P13797 630 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 KRT4P19013 534 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 CDK7P50613 346 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 EFTUD2Q15029 972 aaKnown RBP eCLIP17.17■□□□□ 0.34
LINC00554-201ENST00000564841 IZUMO3Q5VZ72 239 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 RAPH1Q70E73 1250 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 NCSTNQ92542 709 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 FAM84AQ96KN4 292 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 ZNF341Q9BYN7 854 aa17.17■□□□□ 0.34
LINC00554-201ENST00000564841 ESRRAP11474 423 aaPredicted RBP17.16■□□□□ 0.34
LINC00554-201ENST00000564841 ANPEPP15144 967 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 LCA5Q86VQ0 697 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 NAT14Q8WUY8 206 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 HAPLN3Q96S86 360 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 PHACTR1Q9C0D0 580 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 SLC17A7Q9P2U7 560 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 CNTNAP1P78357 1384 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 ETS1P14921 441 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 GJC1P36383 396 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 CDC16Q13042 620 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 ECSITQ9BQ95 431 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 CCDC77Q9BR77 488 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 WNT8AQ9H1J5 351 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 VPS37BQ9H9H4 285 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 ZMYM2Q9UBW7 1377 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 FRMPD4Q14CM0 1322 aa17.16■□□□□ 0.34
LINC00554-201ENST00000564841 H3BRJ5 948 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 hCG_1984214I3L0E3 225 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 MSH4O15457 936 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 TBCAO75347 108 aaKnown RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 TCEA3O75764 348 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 VAV1P15498 845 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 RPL13P26373 211 aaKnown RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 NOP14P78316 857 aaKnown RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 EPC2Q52LR7 807 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 ZNF365Q70YC5 407 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 MARK2Q7KZI7 788 aaKnown RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 ALYREFQ86V81 257 aaKnown RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 TAB3Q8N5C8 712 aaPredicted RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 ZNF713Q8N859 430 aaPredicted RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 PSPC1Q8WXF1 523 aaKnown RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 TRAIPQ9BWF2 469 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 HERC5Q9UII4 1024 aaKnown RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 C10orf71Q711Q0 1435 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 NFKBIEO00221 500 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 DSG1Q02413 1049 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 STAT4Q14765 748 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 SDCCAG8Q86SQ7 713 aaPredicted RBP17.15■□□□□ 0.34
LINC00554-201ENST00000564841 CFAP61Q8NHU2 1237 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 SAR1AQ9NR31 198 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 ZNF510Q9Y2H8 683 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 ATAD5Q96QE3 1844 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 UMODL1Q5DID0 1318 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 B2RBV5 119 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 GOLGA8SH3BPF8 625 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 GOLGA8MH3BSY2 632 aa17.15■□□□□ 0.34
LINC00554-201ENST00000564841 GGPS1O95749 300 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms