RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 LRIG3Q6UXM1 1119 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ZBTB8OSQ8IWT0 167 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 FAM76AQ8TAV0 307 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 PRPF31Q8WWY3 499 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 GLG1Q92896 1179 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ZNF653Q96CK0 615 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CDCA5Q96FF9 252 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 MMP19Q99542 508 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ARHGAP9Q9BRR9 750 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 NUP85Q9BW27 656 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 HAPLN2Q9GZV7 340 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 SMARCAD1Q9H4L7 1026 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 AMACRQ9UHK6 382 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 GOLGA6CA6NDK9 693 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ZSCAN5CA6NGD5 496 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 A6NHS1 94 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 TMEM229AB2RXF0 380 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 PODXLO00592 558 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 HBP1O60381 514 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 VNN1O95497 513 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CYP1A1P04798 512 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 GOLGA6DP0CG33 693 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CD53P19397 219 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 COMTP21964 271 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ACTN2P35609 894 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 LMAN1P49257 510 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 RWDD2BP57060 319 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CENPCQ03188 943 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 POU5F1BQ06416 359 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 BIRC3Q13489 604 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CUL2Q13617 745 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 MOGSQ13724 837 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 HLTFQ14527 1009 aaKnown RBP eCLIP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 MAPK6Q16659 721 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 Q3C1V9 767 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 TBCELQ5QJ74 424 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CCDC62Q6P9F0 684 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 WDR49Q8IV35 697 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 BRSK2Q8IWQ3 736 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 MCOLN2Q8IZK6 566 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ALG3Q92685 438 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ZBTB45Q96K62 511 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 FGD4Q96M96 766 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ACO2Q99798 780 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 PI4K2AQ9BTU6 479 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 IMPG2Q9BZV3 1241 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 FHDC1Q9C0D6 1143 aaPredicted RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CCDC113Q9H0I3 377 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 GOLGA6AQ9NYA3 693 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 CNOT8Q9UFF9 292 aaKnown RBP7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 PCYOX1Q9UHG3 505 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 RASAL2Q9UJF2 1139 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 MTUS1Q9ULD2 1270 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 MSRB2Q9Y3D2 182 aa7.73□□□□□ -1.17
HERPUD1-209ENST00000564678 ZNFX1Q9P2E3 1918 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 OGTO15294 1046 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 SPOPO43791 374 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 CAND2O75155 1236 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 ERLIN2O94905 339 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 CLTAP09496 248 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 FAM153BP0C7A2 387 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 ITGA4P13612 1032 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 ACO1P21399 889 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 ECHS1P30084 290 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 MCL1Q07820 350 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 LAMTOR4Q0VGL1 99 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 SNAPC2Q13487 334 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 TFDP1Q14186 410 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 TTLL4Q14679 1199 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 CYP1B1Q16678 543 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 HSDL1Q3SXM5 330 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 FAM153CQ494X1 144 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 EMC10Q5UCC4 262 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 GPAT2Q6NUI2 795 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 DLK2Q6UY11 383 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 LEKR1Q6ZMV7 388 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 DDX42Q86XP3 938 aaKnown RBP eCLIP7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 MAIP1Q8WWC4 291 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 RIN2Q8WYP3 895 aaPredicted RBP7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 OPTNQ96CV9 577 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 FAXDC2Q96IV6 333 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 CLMNQ96JQ2 1002 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 ZIM3Q96PE6 472 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 ERP44Q9BS26 406 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 NFKBIZQ9BYH8 718 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 FAM129AQ9BZQ8 928 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 MRPL47Q9HD33 250 aaKnown RBP7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 TXNRD2Q9NNW7 524 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 ACP6Q9NPH0 428 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 CALCOCO1Q9P1Z2 691 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 FAM153AQ9UHL3 310 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 LCMT1Q9UIC8 334 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 KLF15Q9UIH9 416 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 LRRC37A2A6NM11 1700 aa7.72□□□□□ -1.17
HERPUD1-209ENST00000564678 ACKR2O00590 384 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 TTI1O43156 1089 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 PEX10O60683 326 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 PHF2O75151 1096 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 ARIH2O95376 493 aa7.71□□□□□ -1.17
HERPUD1-209ENST00000564678 CAPN2P17655 700 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms