RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 DDX17Q92841 729 aaKnown RBP5.62□□□□□ -1.51
CHD9-212ENST00000564641 KAT5Q92993 513 aa5.62□□□□□ -1.51
CHD9-212ENST00000564641 VRK1Q99986 396 aaPredicted RBP5.62□□□□□ -1.51
CHD9-212ENST00000564641 GPR35Q9HC97 309 aa5.62□□□□□ -1.51
CHD9-212ENST00000564641 LINC00473A8K010 186 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 E9PLN8 166 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 DTNBO60941 627 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 IGSF3O75054 1194 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 PRKCGP05129 697 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 GJB1P08034 283 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 ITGALP20701 1170 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 CCND1P24385 295 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 ITPKBP27987 946 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 NDUFV1P49821 464 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 SRSF4Q08170 494 aaKnown RBP5.61□□□□□ -1.51
CHD9-212ENST00000564641 SNAPC2Q13487 334 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 PCBP2Q15366 365 aaKnown RBP eCLIP5.61□□□□□ -1.51
CHD9-212ENST00000564641 TEDDM1Q5T9Z0 273 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 FCRLBQ6BAA4 426 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 SMG7Q92540 1137 aaKnown RBP5.61□□□□□ -1.51
CHD9-212ENST00000564641 LRIG1Q96JA1 1093 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 PUS7Q96PZ0 661 aaKnown RBP5.61□□□□□ -1.51
CHD9-212ENST00000564641 VKORC1Q9BQB6 163 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 TPSD1Q9BZJ3 242 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 WDCPQ9H6R7 721 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 EHD3Q9NZN3 535 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 NR2E3Q9Y5X4 410 aa5.61□□□□□ -1.51
CHD9-212ENST00000564641 NT5C1B-RDH14C9J2C7 533 aa5.6□□□□□ -1.51
CHD9-212ENST00000564641 LPOP22079 712 aaPredicted RBP5.6□□□□□ -1.51
CHD9-212ENST00000564641 ABCG1P45844 678 aa5.6□□□□□ -1.51
CHD9-212ENST00000564641 PROK1P58294 105 aa5.6□□□□□ -1.51
CHD9-212ENST00000564641 KRTAP10-11P60412 298 aa5.6□□□□□ -1.51
CHD9-212ENST00000564641 DSC2Q02487 901 aa5.6□□□□□ -1.51
CHD9-212ENST00000564641 HABP2Q14520 560 aaPredicted RBP5.6□□□□□ -1.51
CHD9-212ENST00000564641 SUMO4Q6EEV6 95 aa5.6□□□□□ -1.51
CHD9-212ENST00000564641 ZDHHC8Q9ULC8 765 aa5.6□□□□□ -1.51
CHD9-212ENST00000564641 ADGRA2Q96PE1 1338 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 POLR2AP24928 1970 aaKnown RBP5.59□□□□□ -1.51
CHD9-212ENST00000564641 DNAJC9-AS1A6NH13 148 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 NXPH3O95157 252 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 GNAI2P04899 355 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 RARBP10826 455 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 PIK3CGP48736 1102 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 HNRNPMP52272 730 aaKnown RBP eCLIP5.59□□□□□ -1.51
CHD9-212ENST00000564641 TCF15Q12870 199 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 PTPN21Q16825 1174 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 PSD4Q8NDX1 1056 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 FKBP10Q96AY3 582 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 NELL2Q99435 816 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 CCDC8Q9H0W5 538 aaPredicted RBP5.59□□□□□ -1.51
CHD9-212ENST00000564641 SERPINB13Q9UIV8 391 aa5.59□□□□□ -1.51
CHD9-212ENST00000564641 CGB1A6NKQ9 187 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 ZNF785A8K8V0 405 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 KATNA1O75449 491 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 ELFN1P0C7U0 828 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 PRDX5P30044 214 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 RECQLP46063 649 aaPredicted RBP5.58□□□□□ -1.52
CHD9-212ENST00000564641 CDKN1CP49918 316 aaPredicted RBP5.58□□□□□ -1.52
CHD9-212ENST00000564641 ZNF135P52742 658 aaPredicted RBP5.58□□□□□ -1.52
CHD9-212ENST00000564641 PSMC1P62191 440 aaKnown RBP5.58□□□□□ -1.52
CHD9-212ENST00000564641 SLC10A2Q12908 348 aaPredicted RBP5.58□□□□□ -1.52
CHD9-212ENST00000564641 BMPR2Q13873 1038 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 KIF22Q14807 665 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 PAPD7Q5XG87 772 aaKnown RBP5.58□□□□□ -1.52
CHD9-212ENST00000564641 PRPF38AQ8NAV1 312 aaKnown RBP5.58□□□□□ -1.52
CHD9-212ENST00000564641 ATRIPQ8WXE1 791 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 RFKQ969G6 155 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 FAM167AQ96KS9 214 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 SLC29A3Q9BZD2 475 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 AMBRA1Q9C0C7 1298 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 ETAA1Q9NY74 926 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 FLRT1Q9NZU1 646 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 PADI4Q9UM07 663 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 RAD54BQ9Y620 910 aa5.58□□□□□ -1.52
CHD9-212ENST00000564641 SBNO2Q9Y2G9 1366 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 AOX1Q06278 1338 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 WIPF3A6NGB9 483 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 MANSC4A6NHS7 340 aaPredicted RBP5.57□□□□□ -1.52
CHD9-212ENST00000564641 VWC2LB2RUY7 222 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 CELA2AP08217 269 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 ZFXP17010 805 aaPredicted RBP5.57□□□□□ -1.52
CHD9-212ENST00000564641 CCT8P50990 548 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 EXOSC10Q01780 885 aaKnown RBP5.57□□□□□ -1.52
CHD9-212ENST00000564641 LLGL1Q15334 1064 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 EPHA10Q5JZY3 1008 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 SFRP4Q6FHJ7 346 aaPredicted RBP5.57□□□□□ -1.52
CHD9-212ENST00000564641 TAF2Q6P1X5 1199 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 SLC30A10Q6XR72 485 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 AMIGO2Q86SJ2 522 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 FAM90A1Q86YD7 464 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 SEMA6DQ8NFY4 1073 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 FAM136AQ96C01 138 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 C1QTNF7Q9BXJ2 289 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 ACTRT3Q9BYD9 372 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 SEMA4CQ9C0C4 833 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 SERTAD4Q9NUC0 356 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 ST3GAL5Q9UNP4 418 aa5.57□□□□□ -1.52
CHD9-212ENST00000564641 LINC01548A6NM66 108 aa5.56□□□□□ -1.52
CHD9-212ENST00000564641 NR2F6P10588 404 aa5.56□□□□□ -1.52
CHD9-212ENST00000564641 CD6P30203 668 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms