RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TAF2Q6P1X5 1199 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 PEG10Q86TG7 708 aaKnown RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 ZBTB46Q86UZ6 589 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 PDSS2Q86YH6 399 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 SRRM1Q8IYB3 904 aaKnown RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 FAM177A1Q8N128 213 aaPredicted RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 ZNF366Q8N895 744 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 TOR1AIP2Q8NFQ8 470 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 DDB2Q92466 427 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 TNPO1Q92973 898 aaKnown RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 SCAMP4Q969E2 229 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 RGMAQ96B86 450 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 CHMP4CQ96CF2 233 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 HOOK2Q96ED9 719 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 HSPBAP1Q96EW2 488 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 GPR35Q9HC97 309 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 ASB6Q9NWX5 421 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 SIDT1Q9NXL6 827 aaKnown RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 IP6K2Q9UHH9 426 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 NOP58Q9Y2X3 529 aaKnown RBP3.96□□□□□ -1.78
CHD9-211ENST00000564600 SPEF1Q9Y4P9 236 aa3.96□□□□□ -1.78
CHD9-211ENST00000564600 WDR27A2RRH5 827 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 CHRM2P08172 466 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 SMARCA1P28370 1054 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 CYP2C19P33261 490 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 PIK3CGP48736 1102 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 ZNF81P51508 661 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 CACNA2D1P54289 1103 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 ELLP55199 621 aaPredicted RBP3.95□□□□□ -1.78
CHD9-211ENST00000564600 EXOSC10Q01780 885 aaKnown RBP3.95□□□□□ -1.78
CHD9-211ENST00000564600 ZNF267Q14586 743 aaPredicted RBP3.95□□□□□ -1.78
CHD9-211ENST00000564600 KIF22Q14807 665 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 TXNRD1Q16881 649 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
CHD9-211ENST00000564600 MICALCLQ6ZW33 695 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 FAM9AQ8IZU1 332 aaPredicted RBP3.95□□□□□ -1.78
CHD9-211ENST00000564600 PSD4Q8NDX1 1056 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 PLBD2Q8NHP8 589 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 ZCRB1Q8TBF4 217 aaKnown RBP3.95□□□□□ -1.78
CHD9-211ENST00000564600 CAGE1Q8TC20 777 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 SMG7Q92540 1137 aaKnown RBP3.95□□□□□ -1.78
CHD9-211ENST00000564600 SNX19Q92543 992 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 SLC9A6Q92581 669 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 FBXL20Q96IG2 436 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 DUSP26Q9BV47 211 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 BRINP2Q9C0B6 783 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 SEMA4GQ9NTN9 838 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 DMTF1Q9Y222 760 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 PCDHA1Q9Y5I3 950 aa3.95□□□□□ -1.78
CHD9-211ENST00000564600 CGB1A6NKQ9 187 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 LINC00473A8K010 186 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 MPPED1O15442 326 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 ABLIM3O94929 683 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 ANXA1P04083 346 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 RPLP2P05387 115 aaKnown RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 PDHA1P08559 390 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 PF4V1P10720 104 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 RARBP10826 455 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 TYRP14679 529 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 HDCP19113 662 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 NPTX2P47972 431 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 PROK1P58294 105 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 NKX6-1P78426 367 aaPredicted RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 EXOSC9Q06265 439 aaKnown RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 PIGFQ07326 219 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 SRSF4Q08170 494 aaKnown RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 PLS1Q14651 629 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 HLXQ14774 488 aaPredicted RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 PGS1Q32NB8 556 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 PREPLQ4J6C6 727 aaPredicted RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 VPS53Q5VIR6 699 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 KAZNQ674X7 775 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 PPP1R32Q7Z5V6 425 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 COL23A1Q86Y22 540 aaPredicted RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 RAVER1Q8IY67 606 aaKnown RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 MVB12AQ96EY5 273 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 SMOQ99835 787 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 RTFDC1Q9BY42 306 aaPredicted RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 RHOBTB2Q9BYZ6 727 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 TINAGL1Q9GZM7 467 aaPredicted RBP3.94□□□□□ -1.78
CHD9-211ENST00000564600 SLC12A5Q9H2X9 1139 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 TCF7L1Q9HCS4 588 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 MAN1C1Q9NR34 630 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 AASDHPPTQ9NRN7 309 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 LMBRD1Q9NUN5 540 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 DKK3Q9UBP4 350 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 ST3GAL5Q9UNP4 418 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 POLHQ9Y253 713 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 NR2E3Q9Y5X4 410 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 ADGRA2Q96PE1 1338 aa3.94□□□□□ -1.78
CHD9-211ENST00000564600 LOC105371045A0A1W2PR82 267 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 WDR91A4D1P6 747 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 F5H697 171 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 ALDH1L1O75891 902 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 DNAJB5O75953 348 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 GNAI3P08754 354 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 ITPKBP27987 946 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 GNAI1P63096 354 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 SP2Q02086 613 aa3.93□□□□□ -1.78
CHD9-211ENST00000564600 MCL1Q07820 350 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms