RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 AGAP1Q9UPQ3 857 aa3.32□□□□□ -1.88
SUB1P3-201ENST00000564581 NR2E3Q9Y5X4 410 aa3.32□□□□□ -1.88
SUB1P3-201ENST00000564581 ADGRA2Q96PE1 1338 aa3.32□□□□□ -1.88
SUB1P3-201ENST00000564581 ABCC10Q5T3U5 1492 aa3.32□□□□□ -1.88
SUB1P3-201ENST00000564581 EIF4G3O43432 1585 aaKnown RBP3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 WDR27A2RRH5 827 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 PRSS29PA6NIE9 313 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 ZNF785A8K8V0 405 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 F5H697 171 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 F2RL2O00254 374 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 SGTAO43765 313 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 KATNA1O75449 491 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 ERBB2P04626 1255 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 NR2F6P10588 404 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 MALP21145 153 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 NPTX2P47972 431 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 ZNF81P51508 661 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 SLC16A1P53985 500 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 DSC2Q02487 901 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 MTMR1Q13613 665 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 FAM50AQ14320 339 aaKnown RBP3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 UAP1L1Q3KQV9 507 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 CCDC93Q567U6 631 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 FAM9AQ8IZU1 332 aaPredicted RBP3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 CAMKK1Q8N5S9 505 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 SMOQ99835 787 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 C1orf43Q9BWL3 253 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 SLAMF7Q9NQ25 335 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 MCM8Q9UJA3 840 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 ATP8A1Q9Y2Q0 1164 aa3.31□□□□□ -1.88
SUB1P3-201ENST00000564581 ABCC8Q09428 1581 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 A0A0B4J269 797 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 CCDC151A5D8V7 595 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 NT5C1B-RDH14C9J2C7 533 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 POLRMTO00411 1230 aaKnown RBP3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 GABRDO14764 452 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 ORC4O43929 436 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 CELA2AP08217 269 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 PDHA1P08559 390 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 WT1P19544 449 aaPredicted RBP3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 CDKN1CP49918 316 aaPredicted RBP3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 GUCY2FP51841 1108 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 POU6F2P78424 691 aaPredicted RBP3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 TFF2Q03403 129 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 PIGFQ07326 219 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 ITKQ08881 620 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 TUBB3Q13509 450 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 RAB39AQ14964 217 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 NBPF8Q3BBV2 869 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 SYDE2Q5VT97 1194 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 TAF2Q6P1X5 1199 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 ZNF782Q6ZMW2 699 aaPredicted RBP3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 POC1BQ8TC44 478 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 NSUN6Q8TEA1 469 aaKnown RBP3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 SCARB1Q8WTV0 552 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 SSH1Q8WYL5 1049 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 RFKQ969G6 155 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 MTMR8Q96EF0 704 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 TPSD1Q9BZJ3 242 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 AMBRA1Q9C0C7 1298 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 BRD9Q9H8M2 597 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 KLC4Q9NSK0 619 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 ETAA1Q9NY74 926 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 CALCOCO1Q9P1Z2 691 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 NEU2Q9Y3R4 380 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 PCDHA3Q9Y5H8 950 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 WNT6Q9Y6F9 365 aa3.3□□□□□ -1.88
SUB1P3-201ENST00000564581 KIF20AO95235 890 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 GJB1P08034 283 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 NDUFV1P49821 464 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 TOB1P50616 345 aaPredicted RBP3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 ZNF135P52742 658 aaPredicted RBP3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 NXPH1P58417 271 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 BOP1Q14137 746 aaKnown RBP3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 HLXQ14774 488 aaPredicted RBP3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 VPS53Q5VIR6 699 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 FCRLBQ6BAA4 426 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 SLC4A10Q6U841 1118 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 PSD4Q8NDX1 1056 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 HASPINQ8TF76 798 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 SMG7Q92540 1137 aaKnown RBP3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 ACTRT3Q9BYD9 372 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 KMT5AQ9NQR1 393 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 PRKAB1Q9Y478 270 aa3.29□□□□□ -1.88
SUB1P3-201ENST00000564581 FNDC1Q4ZHG4 1894 aaPredicted RBP3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 TNKSO95271 1327 aa3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 E7ENX8 843 aa3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 PRKCGP05129 697 aa3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 HNRNPCP07910 306 aaKnown RBP eCLIP3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 EBLN1P0CF75 366 aa3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 NHLRC4P0CG21 123 aaPredicted RBP3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 JUPP14923 745 aa3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 TAP2Q03519 686 aa3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 ITIH3Q06033 890 aa3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 EIF2B5Q13144 721 aaKnown RBP3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 HABP2Q14520 560 aaPredicted RBP3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 TBCCQ15814 346 aa3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 SRSF7Q16629 238 aaKnown RBP eCLIP3.28□□□□□ -1.88
SUB1P3-201ENST00000564581 PTPN21Q16825 1174 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms