RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 METTL23Q86XA0 190 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 OR10T2Q8NGX3 314 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 UHRF1Q96T88 793 aaPredicted RBP18.6■□□□□ 0.57
USB1-209ENST00000564387 ZCWPW1Q9H0M4 648 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 HSFX1Q9UBD0 423 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 CDH22Q9UJ99 828 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 SNX9Q9Y5X1 595 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 C2orf16Q68DN1 1984 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 DENND4AQ7Z401 1863 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 LOC730098B7Z3J9 87 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 HUS1O60921 280 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 C8AP07357 584 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 GTF2H1P32780 548 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 LIN9Q5TKA1 542 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 RNF19BQ6ZMZ0 732 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 RBM43Q6ZSC3 357 aaKnown RBP18.59■□□□□ 0.57
USB1-209ENST00000564387 CCDC149Q6ZUS6 474 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 EEF2KMTQ96G04 330 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 CEP63Q96MT8 703 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 NECAB3Q96P71 396 aaPredicted RBP18.59■□□□□ 0.57
USB1-209ENST00000564387 NUP62CLQ9H1M0 184 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 POMKQ9H5K3 350 aa18.59■□□□□ 0.57
USB1-209ENST00000564387 BICDL2A1A5D9 508 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 TACC1O75410 805 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 SEC24AO95486 1093 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 WEE2P0C1S8 567 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 EPB41P11171 864 aaKnown RBP18.58■□□□□ 0.56
USB1-209ENST00000564387 KRT13P13646 458 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 MYL6P60660 151 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 PPP3CAQ08209 521 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 NCOA4Q13772 614 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 FILIP1Q7Z7B0 1213 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 THEM5Q8N1Q8 247 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 MLKLQ8NB16 471 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 SLC7A14Q8TBB6 771 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 KBTBD7Q8WVZ9 684 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 NELFBQ8WX92 580 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 SYAP1Q96A49 352 aaPredicted RBP18.58■□□□□ 0.56
USB1-209ENST00000564387 TMEM209Q96SK2 561 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 PKMYT1Q99640 499 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 ACBD6Q9BR61 282 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 WDR6Q9NNW5 1121 aaKnown RBP18.58■□□□□ 0.56
USB1-209ENST00000564387 CD320Q9NPF0 282 aa18.58■□□□□ 0.56
USB1-209ENST00000564387 R3HCC1Q9Y3T6 440 aaKnown RBP18.58■□□□□ 0.56
USB1-209ENST00000564387 TULP1O00294 542 aaPredicted RBP18.57■□□□□ 0.56
USB1-209ENST00000564387 OR4Q2P0C623 313 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 CPB1P15086 417 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 LHX1P48742 406 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 ADCY1Q08828 1119 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 SMARCB1Q12824 385 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 PAK1Q13153 545 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 TRPC3Q13507 836 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 PPM1LQ5SGD2 360 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 LRRTM3Q86VH5 581 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 OSTM1Q86WC4 334 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 SMG7Q92540 1137 aaKnown RBP18.57■□□□□ 0.56
USB1-209ENST00000564387 TAF4BQ92750 862 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 MED15Q96RN5 788 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 USTQ9Y2C2 406 aa18.57■□□□□ 0.56
USB1-209ENST00000564387 MTMR11A4FU01 709 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 PHACTR2O75167 634 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 ASS1P00966 412 aaKnown RBP18.56■□□□□ 0.56
USB1-209ENST00000564387 TRIM49P0CI25 452 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 TRIM49CP0CI26 452 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 WARSP23381 471 aaKnown RBP18.56■□□□□ 0.56
USB1-209ENST00000564387 MARSP56192 900 aaKnown RBP18.56■□□□□ 0.56
USB1-209ENST00000564387 ARPP19P56211 112 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 BIRC3Q13489 604 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 SGSM1Q2NKQ1 1148 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 WDR72Q3MJ13 1102 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 KLHL10Q6JEL2 608 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 FRMD5Q7Z6J6 570 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 ADGRF2Q8IZF7 708 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 C2orf15Q8WU43 125 aaKnown RBP18.56■□□□□ 0.56
USB1-209ENST00000564387 CRISPLD1Q9H336 500 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 TMEM8AQ9HCN3 771 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 AVENQ9NQS1 362 aaPredicted RBP18.56■□□□□ 0.56
USB1-209ENST00000564387 RWDD2AQ9UIY3 292 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 INSL5Q9Y5Q6 135 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 CUL9Q8IWT3 2517 aa18.56■□□□□ 0.56
USB1-209ENST00000564387 SPDYE4A6NLX3 237 aa18.55■□□□□ 0.56
USB1-209ENST00000564387 MBD3O95983 291 aa18.55■□□□□ 0.56
USB1-209ENST00000564387 ELF1P32519 619 aa18.55■□□□□ 0.56
USB1-209ENST00000564387 GCLMP48507 274 aa18.55■□□□□ 0.56
USB1-209ENST00000564387 GJD3Q8N144 294 aa18.55■□□□□ 0.56
USB1-209ENST00000564387 SLC35C1Q96A29 364 aa18.55■□□□□ 0.56
USB1-209ENST00000564387 CYP4F11Q9HBI6 524 aa18.55■□□□□ 0.56
USB1-209ENST00000564387 METTL14Q9HCE5 456 aaKnown RBP18.55■□□□□ 0.56
USB1-209ENST00000564387 DDX43Q9NXZ2 648 aaKnown RBP18.55■□□□□ 0.56
USB1-209ENST00000564387 ARMCX3Q9UH62 379 aaPredicted RBP18.55■□□□□ 0.56
USB1-209ENST00000564387 CTNND2Q9UQB3 1225 aa18.55■□□□□ 0.56
USB1-209ENST00000564387 COQ4Q9Y3A0 265 aa18.55■□□□□ 0.56
USB1-209ENST00000564387 PRRG1O14668 218 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 PMM2O15305 246 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 STX10O60499 249 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 XYLBO75191 536 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 HLA-DRAP01903 254 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 PCSK1P29120 753 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 MYL7Q01449 175 aa18.54■□□□□ 0.56
USB1-209ENST00000564387 INTS6LQ5JSJ4 861 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms