RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CYP3A43Q9HB55 503 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 RAB20Q9NX57 234 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 MAGEC2Q9UBF1 373 aaPredicted RBP17.9■□□□□ 0.46
RNF40-206ENST00000564260 AFF4Q9UHB7 1163 aaKnown RBP17.9■□□□□ 0.46
RNF40-206ENST00000564260 FBXW11Q9UKB1 542 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 L1RE1Q9UN81 338 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 EYSQ5T1H1 3165 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 ATG2AQ2TAZ0 1938 aa17.9■□□□□ 0.46
RNF40-206ENST00000564260 TGM5O43548 720 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 CSPG5O95196 566 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 HLA-DRAP01903 254 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 HNRNPA1P09651 372 aaKnown RBP eCLIP17.89■□□□□ 0.45
RNF40-206ENST00000564260 TRIM21P19474 475 aaKnown RBP17.89■□□□□ 0.45
RNF40-206ENST00000564260 WARSP23381 471 aaKnown RBP17.89■□□□□ 0.45
RNF40-206ENST00000564260 FMO5P49326 533 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 TSPY1Q01534 308 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 ROR1Q01973 937 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 MYL5Q02045 173 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 MAPRE1Q15691 268 aaKnown RBP17.89■□□□□ 0.45
RNF40-206ENST00000564260 NFE2Q16621 373 aaPredicted RBP17.89■□□□□ 0.45
RNF40-206ENST00000564260 SOWAHAQ2M3V2 549 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 WDR44Q5JSH3 913 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 LIN9Q5TKA1 542 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 WSCD1Q658N2 575 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 DCP1BQ8IZD4 617 aaKnown RBP17.89■□□□□ 0.45
RNF40-206ENST00000564260 ADGRF2Q8IZF7 708 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 SMRP1Q8NCR6 262 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 CNOT6LQ96LI5 555 aaKnown RBP17.89■□□□□ 0.45
RNF40-206ENST00000564260 CLEC1BQ9P126 229 aa17.89■□□□□ 0.45
RNF40-206ENST00000564260 GTPBP10A4D1E9 387 aaKnown RBP17.88■□□□□ 0.45
RNF40-206ENST00000564260 TBX10O75333 385 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 AFPP02771 609 aaKnown RBP17.88■□□□□ 0.45
RNF40-206ENST00000564260 GTF2F1P35269 517 aaKnown RBP eCLIP17.88■□□□□ 0.45
RNF40-206ENST00000564260 NOP14P78316 857 aaKnown RBP17.88■□□□□ 0.45
RNF40-206ENST00000564260 MRPS5P82675 430 aaKnown RBP17.88■□□□□ 0.45
RNF40-206ENST00000564260 SMAD4Q13485 552 aaKnown RBP17.88■□□□□ 0.45
RNF40-206ENST00000564260 TCEAL8Q8IYN2 117 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 KREMEN2Q8NCW0 462 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 VN1R2Q8NFZ6 395 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 TAS1R2Q8TE23 839 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 FAM81BQ96LP2 452 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 NECTIN4Q96NY8 510 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 MMS19Q96T76 1030 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 ZCWPW1Q9H0M4 648 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 MAN1C1Q9NR34 630 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 CD207Q9UJ71 328 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 NFE2L3Q9Y4A8 694 aa17.88■□□□□ 0.45
RNF40-206ENST00000564260 WDR27A2RRH5 827 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 CPB1P15086 417 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 EPCAMP16422 314 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 RPL17P18621 184 aaKnown RBP17.87■□□□□ 0.45
RNF40-206ENST00000564260 KCNA5P22460 613 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 ELF1P32519 619 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 KCNH2Q12809 1159 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 MAN2A1Q16706 1144 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 CES5AQ6NT32 575 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 RSPO2Q6UXX9 243 aaPredicted RBP17.87■□□□□ 0.45
RNF40-206ENST00000564260 UNC93AQ86WB7 457 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 IRF2BP1Q8IU81 584 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 TMEM130Q8N3G9 435 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 SPPL2BQ8TCT7 592 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 CEP295NLQ96MC4 621 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 BCO2Q9BYV7 579 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 NIF3L1Q9GZT8 377 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 ADAM7Q9H2U9 754 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 ABCB6Q9NP58 842 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 DDX43Q9NXZ2 648 aaKnown RBP17.87■□□□□ 0.45
RNF40-206ENST00000564260 CDH9Q9ULB4 789 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 TIMM13Q9Y5L4 95 aaPredicted RBP17.87■□□□□ 0.45
RNF40-206ENST00000564260 VWA8A3KMH1 1905 aa17.87■□□□□ 0.45
RNF40-206ENST00000564260 REV3LO60673 3130 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 XIRP2A4UGR9 3374 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 LINC01565O15544 149 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 ZMYND10O75800 440 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 TBXAS1P24557 533 aaPredicted RBP17.86■□□□□ 0.45
RNF40-206ENST00000564260 PLD1Q13393 1074 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 NFKBIBQ15653 356 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 CBWD6Q4V339 395 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 CBWD3Q5JTY5 395 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 CBWD5Q5RIA9 395 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 PALB2Q86YC2 1186 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 ANKRD20A12PQ8NF67 263 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 KBTBD7Q8WVZ9 684 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 FUBP3Q96I24 572 aaKnown RBP eCLIP17.86■□□□□ 0.45
RNF40-206ENST00000564260 FAM84AQ96KN4 292 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 TNIP3Q96KP6 325 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 RIPOR3Q96MK2 946 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 FUCA2Q9BTY2 467 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 SNX25Q9H3E2 840 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 NXF1Q9UBU9 619 aaKnown RBP17.86■□□□□ 0.45
RNF40-206ENST00000564260 BARX2Q9UMQ3 279 aaPredicted RBP17.86■□□□□ 0.45
RNF40-206ENST00000564260 SCN1AP35498 2009 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 MYO7AQ13402 2215 aa17.86■□□□□ 0.45
RNF40-206ENST00000564260 SMTNL1A8MU46 457 aa17.85■□□□□ 0.45
RNF40-206ENST00000564260 ADAM12O43184 909 aa17.85■□□□□ 0.45
RNF40-206ENST00000564260 XYLBO75191 536 aa17.85■□□□□ 0.45
RNF40-206ENST00000564260 TPM2P07951 284 aa17.85■□□□□ 0.45
RNF40-206ENST00000564260 GNL1P36915 607 aaPredicted RBP17.85■□□□□ 0.45
RNF40-206ENST00000564260 MTHFRP42898 656 aa17.85■□□□□ 0.45
RNF40-206ENST00000564260 MTIF2P46199 727 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms