RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 BMS1Q14692 1282 aaKnown RBP13.67□□□□□ -0.22
CLK3-214ENST00000564096 STILQ15468 1287 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 SOWAHAQ2M3V2 549 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 HGSNATQ68CP4 663 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 SCARA3Q6AZY7 606 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 PPP1R2P3Q6NXS1 205 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 GPIHBP1Q8IV16 184 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 PDCL2Q8N4E4 241 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 SUSD3Q96L08 255 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 RNPC3Q96LT9 517 aaKnown RBP13.67□□□□□ -0.22
CLK3-214ENST00000564096 ZNF558Q96NG5 402 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 PAAF1Q9BRP4 392 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLK3-214ENST00000564096 SDCBP2Q9H190 292 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 ARHGAP20Q9P2F6 1191 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 CACNG4Q9UBN1 327 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 STK39Q9UEW8 545 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 PCDHB8Q9UN66 801 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 INSL6Q9Y581 213 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 CEP83Q9Y592 693 aa13.67□□□□□ -0.22
CLK3-214ENST00000564096 A8MXQ7 604 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 NRP1O14786 923 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 THAP12O43422 761 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 CD19P15391 556 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 EIF4A3P38919 411 aaKnown RBP13.66□□□□□ -0.22
CLK3-214ENST00000564096 MAGEA10P43363 369 aaPredicted RBP13.66□□□□□ -0.22
CLK3-214ENST00000564096 NDST1P52848 882 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 EPHB4P54760 987 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 CDH8P55286 799 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 BCAR1P56945 870 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 KRT83P78385 493 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 CDR2Q01850 454 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 C1QBPQ07021 282 aaKnown RBP13.66□□□□□ -0.22
CLK3-214ENST00000564096 TIGD5Q53EQ6 642 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 ZNF394Q53GI3 561 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 TRIM72Q6ZMU5 477 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 IRF2BP2Q7Z5L9 587 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 SLC47A2Q86VL8 602 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 HERC6Q8IVU3 1022 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 TMEM176AQ96HP8 235 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 ZNF830Q96NB3 372 aaPredicted RBP13.66□□□□□ -0.22
CLK3-214ENST00000564096 AGPAT1Q99943 283 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 MRPL45Q9BRJ2 306 aaKnown RBP13.66□□□□□ -0.22
CLK3-214ENST00000564096 KIAA1257Q9ULG3 409 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 ZKSCAN5Q9Y2L8 839 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 RWDD3Q9Y3V2 267 aa13.66□□□□□ -0.22
CLK3-214ENST00000564096 EIF3CLB5ME19 914 aaKnown RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 TLL1O43897 1013 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 B4GALT3O60512 393 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 NDUFA10O95299 355 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 CYP11A1P05108 521 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 GALTP07902 379 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 PLEKP08567 350 aaPredicted RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 CCDC175P0C221 793 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 TNFAIP3P21580 790 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 MSNP26038 577 aaKnown RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 CLCN1P35523 988 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 GNL1P36915 607 aaPredicted RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 BRCC3P46736 316 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 HTRA4P83105 476 aaPredicted RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 YWHAHQ04917 246 aaPredicted RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 SLC18A3Q16572 532 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 SGO2Q562F6 1265 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 TAF3Q5VWG9 929 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 WSCD1Q658N2 575 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 OVOS1Q6IE37 1185 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 FUT10Q6P4F1 479 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 ZNF571Q7Z3V5 609 aaPredicted RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 NOP9Q86U38 636 aaKnown RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 THEM5Q8N1Q8 247 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 FIBCD1Q8N539 461 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 KBTBD7Q8WVZ9 684 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 RABGGTAQ92696 567 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 TMEM169Q96HH4 297 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 EIF3CQ99613 913 aaKnown RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 RAD9AQ99638 391 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 CHP1Q99653 195 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 MARCH5Q9NX47 278 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 CXXC1Q9P0U4 656 aaPredicted RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 HMGXB4Q9UGU5 601 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 NOCTQ9UK39 431 aaKnown RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 STXBP5LQ9Y2K9 1186 aa13.65□□□□□ -0.22
CLK3-214ENST00000564096 MRPL42Q9Y6G3 142 aaKnown RBP13.65□□□□□ -0.22
CLK3-214ENST00000564096 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
CLK3-214ENST00000564096 LSM8O95777 96 aaKnown RBP13.64□□□□□ -0.23
CLK3-214ENST00000564096 ITGB1P05556 798 aa13.64□□□□□ -0.23
CLK3-214ENST00000564096 VDRP11473 427 aa13.64□□□□□ -0.23
CLK3-214ENST00000564096 RAD23BP54727 409 aa13.64□□□□□ -0.23
CLK3-214ENST00000564096 TSPY1Q01534 308 aa13.64□□□□□ -0.23
CLK3-214ENST00000564096 C10orf76Q5T2E6 689 aa13.64□□□□□ -0.23
CLK3-214ENST00000564096 ZNF280DQ6N043 979 aa13.64□□□□□ -0.23
CLK3-214ENST00000564096 KCNT2Q6UVM3 1135 aa13.64□□□□□ -0.23
CLK3-214ENST00000564096 RAD9BQ6WBX8 426 aa13.64□□□□□ -0.23
CLK3-214ENST00000564096 TMCO2Q7Z6W1 182 aaPredicted RBP13.64□□□□□ -0.23
CLK3-214ENST00000564096 ZSCAN30Q86W11 494 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms