RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TSC2P49815 1807 aa23.39■■□□□ 1.33
LINC01960-201ENST00000563759 HUS1O60921 280 aa23.39■■□□□ 1.33
LINC01960-201ENST00000563759 RTN2O75298 545 aa23.39■■□□□ 1.33
LINC01960-201ENST00000563759 GALCP54803 685 aa23.39■■□□□ 1.33
LINC01960-201ENST00000563759 SOWAHAQ2M3V2 549 aa23.39■■□□□ 1.33
LINC01960-201ENST00000563759 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.39■■□□□ 1.33
LINC01960-201ENST00000563759 TRIM72Q6ZMU5 477 aa23.39■■□□□ 1.33
LINC01960-201ENST00000563759 PASD1Q8IV76 773 aa23.39■■□□□ 1.33
LINC01960-201ENST00000563759 MRPL45Q9BRJ2 306 aaKnown RBP23.39■■□□□ 1.33
LINC01960-201ENST00000563759 ELOVL4Q9GZR5 314 aa23.39■■□□□ 1.33
LINC01960-201ENST00000563759 PAXBP1Q9Y5B6 917 aa23.39■■□□□ 1.33
LINC01960-201ENST00000563759 FTLP02792 175 aaPredicted RBP23.38■■□□□ 1.33
LINC01960-201ENST00000563759 SSTR3P32745 418 aaPredicted RBP23.38■■□□□ 1.33
LINC01960-201ENST00000563759 RFC2P35250 354 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 NAP1L1P55209 391 aaKnown RBP23.38■■□□□ 1.33
LINC01960-201ENST00000563759 UPP1Q16831 310 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 CLEC16AQ2KHT3 1053 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 NOMO2Q5JPE7 1267 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 SLC4A11Q8NBS3 891 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 KIF18AQ8NI77 898 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 RABGGTAQ92696 567 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 UROC1Q96N76 676 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 WDR24Q96S15 920 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 NT5C1AQ9BXI3 368 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 ISCUQ9H1K1 167 aa23.38■■□□□ 1.33
LINC01960-201ENST00000563759 RNASELQ05823 741 aaKnown RBP23.37■■□□□ 1.33
LINC01960-201ENST00000563759 OR6B3Q8NGW1 331 aa23.37■■□□□ 1.33
LINC01960-201ENST00000563759 DDX27Q96GQ7 796 aaKnown RBP23.37■■□□□ 1.33
LINC01960-201ENST00000563759 PAAF1Q9BRP4 392 aa23.37■■□□□ 1.33
LINC01960-201ENST00000563759 ANKRD62A6NC57 917 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 MED7O43513 233 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 CNKSR3Q6P9H4 555 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 ADGRF2Q8IZF7 708 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 TOP6BLQ8N6T0 577 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 KANSL3Q9P2N6 904 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 L1RE1Q9UN81 338 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 TACC1O75410 805 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 MOCS3O95396 460 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 CFHP08603 1231 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 TMEM253P0C7T8 217 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 NSFP46459 744 aaKnown RBP23.36■■□□□ 1.33
LINC01960-201ENST00000563759 NAA35Q5VZE5 725 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 SLC35F6Q8N357 371 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 C3orf58Q8NDZ4 430 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 TFAP2BQ92481 460 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 HEXIM2Q96MH2 286 aaKnown RBP23.36■■□□□ 1.33
LINC01960-201ENST00000563759 NOX5Q96PH1 765 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 ALS2CR12Q96Q35 445 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 THAP2Q9H0W7 228 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 SNX25Q9H3E2 840 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 CEP83Q9Y592 693 aa23.36■■□□□ 1.33
LINC01960-201ENST00000563759 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.35■■□□□ 1.33
LINC01960-201ENST00000563759 BTNL10A8MVZ5 291 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 A8MXQ7 604 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 CYB561D2O14569 222 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 BUB1O43683 1085 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 B3GAT3O94766 335 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 TIMP1P01033 207 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 CYP1A1P04798 512 aaPredicted RBP23.35■■□□□ 1.33
LINC01960-201ENST00000563759 RAG1P15918 1043 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 EN2P19622 333 aaPredicted RBP23.35■■□□□ 1.33
LINC01960-201ENST00000563759 CASQ1P31415 396 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 IKBKEQ14164 716 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 ACAD10Q6JQN1 1059 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 DPH6Q7L8W6 267 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 UNC93AQ86WB7 457 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 RNF10Q8N5U6 811 aaKnown RBP23.35■■□□□ 1.33
LINC01960-201ENST00000563759 KBTBD7Q8WVZ9 684 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 CYFIP2Q96F07 1278 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 ZSWIM1Q9BR11 485 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 TBC1D13Q9NVG8 400 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 RNF216Q9NWF9 866 aaPredicted RBP23.35■■□□□ 1.33
LINC01960-201ENST00000563759 SALL4Q9UJQ4 1053 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 CAPN6Q9Y6Q1 641 aa23.35■■□□□ 1.33
LINC01960-201ENST00000563759 TRIM43BA6NCK2 446 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 HOXA2O43364 376 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 UNGP13051 313 aaPredicted RBP23.34■■□□□ 1.33
LINC01960-201ENST00000563759 NOMO3P69849 1222 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 CENPCQ03188 943 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 DSTYKQ6XUX3 929 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 CPA5Q8WXQ8 436 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 TRIM43Q96BQ3 446 aaPredicted RBP23.34■■□□□ 1.33
LINC01960-201ENST00000563759 SENP8Q96LD8 212 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 FAM193BQ96PV7 902 aaPredicted RBP23.34■■□□□ 1.33
LINC01960-201ENST00000563759 DNAI2Q9GZS0 605 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 NCANO14594 1321 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 KIAA0355O15063 1070 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 LSM8O95777 96 aaKnown RBP23.34■■□□□ 1.33
LINC01960-201ENST00000563759 VDRP11473 427 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 PAN2Q504Q3 1202 aaKnown RBP23.34■■□□□ 1.33
LINC01960-201ENST00000563759 SGO2Q562F6 1265 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 PDCL2Q8N4E4 241 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 TRIM58Q8NG06 486 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 RFFLQ8WZ73 363 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 PCDHGC3Q9UN70 934 aa23.34■■□□□ 1.33
LINC01960-201ENST00000563759 A0A0A6YYK5 440 aaPredicted RBP23.33■■□□□ 1.33
LINC01960-201ENST00000563759 IGFBP6P24592 240 aaPredicted RBP23.33■■□□□ 1.33
LINC01960-201ENST00000563759 GNL1P36915 607 aaPredicted RBP23.33■■□□□ 1.33
LINC01960-201ENST00000563759 NOP2P46087 812 aaKnown RBP23.33■■□□□ 1.33
LINC01960-201ENST00000563759 PPP1R2P3Q6NXS1 205 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms