RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 TXNDC11Q6PKC3 985 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 Q6ZS52 159 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.26■□□□□ 0.83
NME3-204ENST00000563498 FAM200AQ8TCP9 573 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 PPP4R2Q9NY27 417 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 TBX20Q9UMR3 447 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 KIF3AQ9Y496 699 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 CACNA1BQ00975 2339 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 ACACBO00763 2458 aa20.26■□□□□ 0.83
NME3-204ENST00000563498 TPRP12270 2363 aaKnown RBP20.26■□□□□ 0.83
NME3-204ENST00000563498 SLC26A4O43511 780 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 CYP11A1P05108 521 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 GABRR2P28476 465 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 TUFMP49411 452 aaKnown RBP20.25■□□□□ 0.83
NME3-204ENST00000563498 CCINQ13939 588 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 GPR158Q5T848 1215 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 ARL6IP4Q66PJ3 421 aaKnown RBP20.25■□□□□ 0.83
NME3-204ENST00000563498 PRR23CQ6ZRP0 262 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 TTC9BQ8N6N2 239 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 SENP8Q96LD8 212 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 PLIN2Q99541 437 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 TASP1Q9H6P5 420 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 GTSE1Q9NYZ3 720 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 ZMYM5Q9UJ78 669 aa20.25■□□□□ 0.83
NME3-204ENST00000563498 A0A0B4J269 797 aa20.24■□□□□ 0.83
NME3-204ENST00000563498 NPHP3-ACAD11A0A0J9YXS1 232 aa20.24■□□□□ 0.83
NME3-204ENST00000563498 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.24■□□□□ 0.83
NME3-204ENST00000563498 VWA3AA6NCI4 1184 aa20.24■□□□□ 0.83
NME3-204ENST00000563498 PPEF2O14830 753 aa20.24■□□□□ 0.83
NME3-204ENST00000563498 CACNB1Q02641 598 aaPredicted RBP20.24■□□□□ 0.83
NME3-204ENST00000563498 C9orf57Q5W0N0 161 aa20.24■□□□□ 0.83
NME3-204ENST00000563498 BPIFB1Q8TDL5 484 aa20.24■□□□□ 0.83
NME3-204ENST00000563498 ZFYVE19Q96K21 471 aa20.24■□□□□ 0.83
NME3-204ENST00000563498 CPSF3Q9UKF6 684 aaKnown RBP20.24■□□□□ 0.83
NME3-204ENST00000563498 DSEQ9UL01 958 aa20.24■□□□□ 0.83
NME3-204ENST00000563498 DERAQ9Y315 318 aa20.24■□□□□ 0.83
NME3-204ENST00000563498 TSC2P49815 1807 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 PIRO00625 290 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 CDC25CP30307 473 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 ABCD1P33897 745 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 ZNF131P52739 623 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 SRSF5Q13243 272 aaKnown RBP20.23■□□□□ 0.83
NME3-204ENST00000563498 VEPH1Q14D04 833 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 PON2Q15165 354 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 JADE1Q6IE81 842 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 WDR5BQ86VZ2 330 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 GPIHBP1Q8IV16 184 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 OR10T2Q8NGX3 314 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 C2orf15Q8WU43 125 aaKnown RBP20.23■□□□□ 0.83
NME3-204ENST00000563498 AK8Q96MA6 479 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 TMEM209Q96SK2 561 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 KIF2CQ99661 725 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 REEP2Q9BRK0 252 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 MSTO1Q9BUK6 570 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 ZCWPW1Q9H0M4 648 aa20.23■□□□□ 0.83
NME3-204ENST00000563498 THG1LQ9NWX6 298 aaKnown RBP20.23■□□□□ 0.83
NME3-204ENST00000563498 ANO9A1A5B4 782 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 SOAT2O75908 522 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 PRAMEF12O95522 483 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 MCM2P49736 904 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 SMARCB1Q12824 385 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 PTPAQ15257 358 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 PPM1JQ5JR12 505 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 HEATR6Q6AI08 1181 aaKnown RBP20.22■□□□□ 0.83
NME3-204ENST00000563498 MCTP1Q6DN14 999 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 FAM160A2Q8N612 972 aaPredicted RBP20.22■□□□□ 0.83
NME3-204ENST00000563498 TTC8Q8TAM2 541 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 SEPT5Q99719 369 aaPredicted RBP20.22■□□□□ 0.83
NME3-204ENST00000563498 LPIN3Q9BQK8 851 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 ASB7Q9H672 318 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 IL21Q9HBE4 155 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 PARVGQ9HBI0 331 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 C2orf42Q9NWW7 574 aa20.22■□□□□ 0.83
NME3-204ENST00000563498 K7ENM7 598 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 NFICP08651 508 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 ATF6P18850 670 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 TMEM132DQ14C87 1099 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 ITPRIPL2Q3MIP1 535 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 SLC39A12Q504Y0 691 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 CEP68Q76N32 757 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 GPBP1Q86WP2 473 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 MYCT1Q8N699 235 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 DDX1Q92499 740 aaKnown RBP20.21■□□□□ 0.83
NME3-204ENST00000563498 FAM212AQ96EL1 285 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 GCNAQ96QF7 691 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 C2CD2Q9Y426 696 aa20.21■□□□□ 0.83
NME3-204ENST00000563498 KIF26AQ9ULI4 1882 aaPredicted RBP20.2■□□□□ 0.82
NME3-204ENST00000563498 CCDC163A0A0D9SF12 145 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 TRAK2O60296 914 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 FAM13AO94988 1023 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 POU5F1Q01860 360 aaKnown RBP20.2■□□□□ 0.82
NME3-204ENST00000563498 TNK2Q07912 1038 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 MGAT5BQ3V5L5 792 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 SLC39A4Q6P5W5 647 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 METTL23Q86XA0 190 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 SPPL2BQ8TCT7 592 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 CALML4Q96GE6 196 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 LOXL4Q96JB6 756 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 CCSER1Q9C0I3 900 aa20.2■□□□□ 0.82
NME3-204ENST00000563498 SOBPA7XYQ1 873 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms