RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 PRPF40AO75400 957 aaKnown RBP30.43■■■□□ 2.46
NME3-203ENST00000563367 KIF20AO95235 890 aa30.43■■■□□ 2.46
NME3-203ENST00000563367 CST3P01034 146 aaPredicted RBP30.43■■■□□ 2.46
NME3-203ENST00000563367 CDR1P51861 262 aa30.43■■■□□ 2.46
NME3-203ENST00000563367 TWF1Q12792 350 aa30.43■■■□□ 2.46
NME3-203ENST00000563367 PABPC1LQ4VXU2 614 aaKnown RBP30.43■■■□□ 2.46
NME3-203ENST00000563367 CENPPQ6IPU0 288 aa30.43■■■□□ 2.46
NME3-203ENST00000563367 LRRTM3Q86VH5 581 aa30.43■■■□□ 2.46
NME3-203ENST00000563367 ATAD1Q8NBU5 361 aa30.43■■■□□ 2.46
NME3-203ENST00000563367 SORCS3Q9UPU3 1222 aa30.43■■■□□ 2.46
NME3-203ENST00000563367 SLC27A5Q9Y2P5 690 aa30.43■■■□□ 2.46
NME3-203ENST00000563367 RHOP08100 348 aa30.42■■■□□ 2.46
NME3-203ENST00000563367 LAMP2P13473 410 aa30.42■■■□□ 2.46
NME3-203ENST00000563367 SLC39A12Q504Y0 691 aa30.42■■■□□ 2.46
NME3-203ENST00000563367 TTC9BQ8N6N2 239 aa30.42■■■□□ 2.46
NME3-203ENST00000563367 PARD3BQ8TEW8 1205 aa30.42■■■□□ 2.46
NME3-203ENST00000563367 KCNK12Q9HB15 430 aa30.42■■■□□ 2.46
NME3-203ENST00000563367 CEP72Q9P209 647 aa30.42■■■□□ 2.46
NME3-203ENST00000563367 YIPF1Q9Y548 306 aa30.42■■■□□ 2.46
NME3-203ENST00000563367 PCDHA5Q9Y5H7 936 aa30.42■■■□□ 2.46
NME3-203ENST00000563367 HUS1O60921 280 aa30.41■■■□□ 2.46
NME3-203ENST00000563367 PTPN2P17706 415 aa30.41■■■□□ 2.46
NME3-203ENST00000563367 MYO1EQ12965 1108 aa30.41■■■□□ 2.46
NME3-203ENST00000563367 SLC5A9Q2M3M2 681 aa30.41■■■□□ 2.46
NME3-203ENST00000563367 SOWAHAQ2M3V2 549 aa30.41■■■□□ 2.46
NME3-203ENST00000563367 TRIM67Q6ZTA4 783 aa30.41■■■□□ 2.46
NME3-203ENST00000563367 SPATA20Q8TB22 786 aa30.41■■■□□ 2.46
NME3-203ENST00000563367 R3HCC1Q9Y3T6 440 aaKnown RBP30.41■■■□□ 2.46
NME3-203ENST00000563367 LRRIQ3A6PVS8 624 aaPredicted RBP30.4■■■□□ 2.46
NME3-203ENST00000563367 MTMR3Q13615 1198 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 NFIL3Q16649 462 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 CEP135Q66GS9 1140 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 OSTM1Q86WC4 334 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 TOP6BLQ8N6T0 577 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 RSAD2Q8WXG1 361 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 FGF13Q92913 245 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 GSDMAQ96QA5 445 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 CORO1BQ9BR76 489 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 RMND1Q9NWS8 449 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 CDH7Q9ULB5 785 aa30.4■■■□□ 2.46
NME3-203ENST00000563367 SOAT2O75908 522 aa30.39■■■□□ 2.46
NME3-203ENST00000563367 DLG4P78352 724 aa30.39■■■□□ 2.46
NME3-203ENST00000563367 CLDN10P78369 228 aa30.39■■■□□ 2.46
NME3-203ENST00000563367 ZCWPW2Q504Y3 356 aa30.39■■■□□ 2.46
NME3-203ENST00000563367 LIMS2Q7Z4I7 341 aa30.39■■■□□ 2.46
NME3-203ENST00000563367 HS6ST3Q8IZP7 471 aa30.39■■■□□ 2.46
NME3-203ENST00000563367 TMEM86AQ8N2M4 240 aa30.39■■■□□ 2.46
NME3-203ENST00000563367 ST13P5Q8NFI4 369 aaPredicted RBP30.39■■■□□ 2.46
NME3-203ENST00000563367 AVENQ9NQS1 362 aaPredicted RBP30.39■■■□□ 2.46
NME3-203ENST00000563367 PRR33A8MZF0 331 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 HCRTO43612 131 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 SMC2O95347 1197 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 NR2F2P24468 414 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 ACAT1P24752 427 aaKnown RBP30.38■■■□□ 2.45
NME3-203ENST00000563367 SIGLEC14Q08ET2 396 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 ZNF658Q5TYW1 1059 aaPredicted RBP30.38■■■□□ 2.45
NME3-203ENST00000563367 ADGRF2Q8IZF7 708 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 ING5Q8WYH8 240 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 SMARCE1Q969G3 411 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 TMLHEQ9NVH6 421 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 DDX43Q9NXZ2 648 aaKnown RBP30.38■■■□□ 2.45
NME3-203ENST00000563367 IGSF9Q9P2J2 1179 aa30.38■■■□□ 2.45
NME3-203ENST00000563367 MRPS23Q9Y3D9 190 aaKnown RBP30.38■■■□□ 2.45
NME3-203ENST00000563367 TMEM221A6NGB7 291 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 M0R296 226 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 NRG2O14511 850 aaPredicted RBP30.37■■■□□ 2.45
NME3-203ENST00000563367 PRCPP42785 496 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 PRSS36Q5K4E3 855 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 TDRD10Q5VZ19 366 aaKnown RBP30.37■■■□□ 2.45
NME3-203ENST00000563367 POTEHQ6S545 545 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 ELOA2Q8IYF1 753 aaPredicted RBP30.37■■■□□ 2.45
NME3-203ENST00000563367 UBALD2Q8IYN6 164 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 TCEAL4Q96EI5 215 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 ASIC4Q96FT7 647 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 ZNF512Q96ME7 567 aaPredicted RBP30.37■■■□□ 2.45
NME3-203ENST00000563367 DNAJC25Q9H1X3 360 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 HOOK1Q9UJC3 728 aaKnown RBP30.37■■■□□ 2.45
NME3-203ENST00000563367 FRMD4BQ9Y2L6 1034 aa30.37■■■□□ 2.45
NME3-203ENST00000563367 ZFP37Q9Y6Q3 630 aaPredicted RBP30.37■■■□□ 2.45
NME3-203ENST00000563367 ANHXE9PGG2 379 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 GABRDO14764 452 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 KINO60870 393 aaKnown RBP30.36■■■□□ 2.45
NME3-203ENST00000563367 AKAP3O75969 853 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 C4BPAP04003 597 aaKnown RBP30.36■■■□□ 2.45
NME3-203ENST00000563367 CCR2P41597 374 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 MYL6P60660 151 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 TDGQ13569 410 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 HFE2Q6ZVN8 426 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 NPAS3Q8IXF0 933 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 ELMOD1Q8N336 334 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 KBTBD7Q8WVZ9 684 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 ACBD6Q9BR61 282 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 HSFX1Q9UBD0 423 aa30.36■■■□□ 2.45
NME3-203ENST00000563367 CEBPBP17676 345 aa30.35■■■□□ 2.45
NME3-203ENST00000563367 HTR4Q13639 388 aa30.35■■■□□ 2.45
NME3-203ENST00000563367 C1orf220Q5T0J3 134 aa30.35■■■□□ 2.45
NME3-203ENST00000563367 IQCEQ6IPM2 695 aa30.35■■■□□ 2.45
NME3-203ENST00000563367 DPH6Q7L8W6 267 aa30.35■■■□□ 2.45
NME3-203ENST00000563367 DCP1BQ8IZD4 617 aaKnown RBP30.35■■■□□ 2.45
NME3-203ENST00000563367 SPATA18Q8TC71 538 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms