RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 RASA4O43374 803 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 FAM20BO75063 409 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 ZFPL1O95159 310 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 NR4A1P22736 598 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 RPS16P62249 146 aaKnown RBP6.9□□□□□ -1.3
LINC00557-201ENST00000563184 ADAM17P78536 824 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 HTRA4P83105 476 aaPredicted RBP6.9□□□□□ -1.3
LINC00557-201ENST00000563184 SPDYAQ5MJ70 313 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 B3GNTL1Q67FW5 361 aaPredicted RBP6.9□□□□□ -1.3
LINC00557-201ENST00000563184 TAPT1Q6NXT6 567 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 MORC1Q86VD1 984 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 MAPKAPK5Q8IW41 473 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 DNAJC5GQ8N7S2 189 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 SPATA5L1Q9BVQ7 753 aa6.9□□□□□ -1.3
LINC00557-201ENST00000563184 UNKQ9C0B0 810 aaKnown RBP6.9□□□□□ -1.3
LINC00557-201ENST00000563184 ZNF703Q9H7S9 590 aaPredicted RBP6.9□□□□□ -1.3
LINC00557-201ENST00000563184 AURKAIP1Q9NWT8 199 aaPredicted RBP6.9□□□□□ -1.3
LINC00557-201ENST00000563184 POLRMTO00411 1230 aaKnown RBP6.89□□□□□ -1.31
LINC00557-201ENST00000563184 TBC1D4O60343 1298 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 CFIP05156 583 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 TSHRP16473 764 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 ZKSCAN1P17029 563 aaPredicted RBP6.89□□□□□ -1.31
LINC00557-201ENST00000563184 HTR3AP46098 478 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 DAG1Q14118 895 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 BRD3Q15059 726 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 USP39Q53GS9 565 aaKnown RBP6.89□□□□□ -1.31
LINC00557-201ENST00000563184 FAM160B1Q5W0V3 765 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.89□□□□□ -1.31
LINC00557-201ENST00000563184 TMPRSS9Q7Z410 1059 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 SRLQ86TD4 932 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 SLC15A4Q8N697 577 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 RNF152Q8N8N0 203 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 OR56A3Q8NH54 315 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 MYD88Q99836 296 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 SLC46A2Q9BY10 475 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 KRTAP4-11Q9BYQ6 195 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 KRTAP4-2Q9BYR5 136 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 ZNF518BQ9C0D4 1074 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 SIK2Q9H0K1 926 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 HESX1Q9UBX0 185 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 TSC22D4Q9Y3Q8 395 aa6.89□□□□□ -1.31
LINC00557-201ENST00000563184 POM121BA6NF01 834 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 FOXN3O00409 490 aaPredicted RBP6.88□□□□□ -1.31
LINC00557-201ENST00000563184 DCLK1O15075 740 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 VPS4BO75351 444 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 NCR1O76036 304 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 RECQL4O94761 1208 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 IL18RAPO95256 599 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 GPANK1O95872 356 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 SPATA31D3P0C874 917 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 MC2RQ01718 297 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 PIGFQ07326 219 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 ZNF844Q08AG5 666 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 SPATS1Q496A3 300 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 LMBRD2Q68DH5 695 aaPredicted RBP6.88□□□□□ -1.31
LINC00557-201ENST00000563184 XRRA1Q6P2D8 792 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 SPATA31D4Q6ZUB0 917 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 PRRT2Q7Z6L0 340 aaPredicted RBP6.88□□□□□ -1.31
LINC00557-201ENST00000563184 C1orf210Q8IVY1 113 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 TMEM132CQ8N3T6 1108 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 OR2C3Q8N628 320 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 POC1BQ8TC44 478 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 SGCZQ96LD1 299 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 RIPOR3Q96MK2 946 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 TRIB1Q96RU8 372 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 SMOQ99835 787 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 XPR1Q9UBH6 696 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 TMX2Q9Y320 296 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 FPGT-TNNI3KV9GXZ4 949 aa6.88□□□□□ -1.31
LINC00557-201ENST00000563184 CCDC195A0A1B0GUA6 201 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 NCK2O43639 380 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 SUN1O94901 812 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 IL1R1P14778 569 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 KCNA2P16389 499 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 CHRM3P20309 590 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 STT3AP46977 705 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 BIRC2Q13490 618 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 RAB32Q13637 225 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 DCAF12L1Q5VU92 463 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 TAF2Q6P1X5 1199 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 SLC30A10Q6XR72 485 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 TOGARAM2Q6ZUX3 1019 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 LIX1LQ8IVB5 337 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 FAM186BQ8IYM0 893 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 SPICE1Q8N0Z3 855 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 PSD4Q8NDX1 1056 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 NACC2Q96BF6 587 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 TNIP3Q96KP6 325 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 CCDC138Q96M89 665 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 MED15Q96RN5 788 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 CDK5RAP1Q96SZ6 601 aaKnown RBP6.87□□□□□ -1.31
LINC00557-201ENST00000563184 SMOC2Q9H3U7 446 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 PNPLA8Q9NP80 782 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 NLRC4Q9NPP4 1024 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 AKIP1Q9NQ31 210 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 DKK2Q9UBU2 259 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 KCNE5Q9UJ90 142 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 MAP3K2Q9Y2U5 619 aa6.87□□□□□ -1.31
LINC00557-201ENST00000563184 MBD3L4A6NDZ8 208 aaPredicted RBP6.86□□□□□ -1.31
LINC00557-201ENST00000563184 MBD3L3A6NE82 208 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms