RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 RIPK3Q9Y572 518 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 NUB1Q9Y5A7 615 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 USH1CQ9Y6N9 552 aa13.83□□□□□ -0.2
USB1-207ENST00000563149 PTPRJQ12913 1337 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 ZNF541Q9H0D2 1346 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 CNTNAP2Q9UHC6 1331 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 TCRBV5S1A1TA0A578 114 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 GCAP28676 217 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 FOXN2P32314 431 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 ARSEP51690 589 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 VCPP55072 806 aaKnown RBP13.82□□□□□ -0.2
USB1-207ENST00000563149 WNT7BP56706 349 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 WDR4P57081 412 aaKnown RBP13.82□□□□□ -0.2
USB1-207ENST00000563149 NCOA4Q13772 614 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 SETDB1Q15047 1291 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 OASLQ15646 514 aaKnown RBP13.82□□□□□ -0.2
USB1-207ENST00000563149 DAB2IPQ5VWQ8 1189 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 CYP4F22Q6NT55 531 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 MFSD7Q6UXD7 560 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 TMEM35BQ8NCS4 154 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 RSRC1Q96IZ7 334 aaKnown RBP13.82□□□□□ -0.2
USB1-207ENST00000563149 L3MBTL3Q96JM7 780 aaPredicted RBP13.82□□□□□ -0.2
USB1-207ENST00000563149 SMC6Q96SB8 1091 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 HAPLN2Q9GZV7 340 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 TRABDQ9H4I3 376 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 NOP53Q9NZM5 478 aaKnown RBP13.82□□□□□ -0.2
USB1-207ENST00000563149 ADAMTS5Q9UNA0 930 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 MAFBQ9Y5Q3 323 aaPredicted RBP13.82□□□□□ -0.2
USB1-207ENST00000563149 ADGRA2Q96PE1 1338 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 KIAA1217Q5T5P2 1943 aa13.82□□□□□ -0.2
USB1-207ENST00000563149 hCG_1818297A0A087WSY0 165 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 SMAPO00193 183 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 DCTN3O75935 186 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 UNC5CO95185 931 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 OATP04181 439 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 GLRA2P23416 452 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 ICAM3P32942 547 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 CDH5P33151 784 aaPredicted RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 GJC1P36383 396 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 RFC5P40937 340 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 MSH2P43246 934 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 BACE1P56817 501 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 LACTBP83111 547 aaPredicted RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 CXCL9Q07325 125 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 MGAT5Q09328 741 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 SURF1Q15526 300 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 ZKSCAN8Q15776 578 aaPredicted RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 PDK4Q16654 411 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 PARP6Q2NL67 630 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 TFDP3Q5H9I0 405 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 RNASEH2BQ5TBB1 312 aaKnown RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 DNAJC24Q6P3W2 148 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 POLNQ7Z5Q5 900 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 ECHDC2Q86YB7 292 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 C12orf42Q96LP6 360 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 ZNF302Q9NR11 478 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 GGT7Q9UJ14 662 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 FOXO6A8MYZ6 492 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 ASS1P00966 412 aaKnown RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 KRT10P13645 584 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 PECAM1P16284 738 aaPredicted RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 EIF4BP23588 611 aaKnown RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 ALDH3A1P30838 453 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 PHBP35232 272 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 ATP11AP98196 1134 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 GPS1Q13098 491 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 DGKZQ13574 1117 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 PPP1R15BQ5SWA1 713 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 ZFYVE27Q5T4F4 411 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 KAZNQ674X7 775 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 CIAPIN1Q6FI81 312 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 ZPBP2Q6X784 338 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 WDR49Q8IV35 697 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 BRSK2Q8IWQ3 736 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 TTC13Q8NBP0 860 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 ASAP3Q8TDY4 903 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 AGAP11Q8TF27 550 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 N4BP2L2Q92802 583 aaPredicted RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 TBC1D31Q96DN5 1066 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 ZBTB45Q96K62 511 aaPredicted RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 RMDN2Q96LZ7 410 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 FAM118BQ9BPY3 351 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 FHDC1Q9C0D6 1143 aaPredicted RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 PSMC3IPQ9P2W1 217 aaPredicted RBP13.81□□□□□ -0.2
USB1-207ENST00000563149 PHTF1Q9UMS5 762 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 PCDHGC3Q9UN70 934 aa13.81□□□□□ -0.2
USB1-207ENST00000563149 LRRIQ4A6NIV6 560 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 PI4K2BG5E9Z4 385 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 EDF1O60869 148 aaKnown RBP13.8□□□□□ -0.2
USB1-207ENST00000563149 KRT16P08779 473 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 TSHRP16473 764 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 ATF7P17544 494 aaPredicted RBP13.8□□□□□ -0.2
USB1-207ENST00000563149 KRT15P19012 456 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 SLC8A3P57103 927 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 TGFB2P61812 414 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 RPL7AP62424 266 aaKnown RBP13.8□□□□□ -0.2
USB1-207ENST00000563149 MOGSQ13724 837 aa13.8□□□□□ -0.2
USB1-207ENST00000563149 ATP13A4Q4VNC1 1196 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms