RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ITGA11Q9UKX5 1188 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 BARX2Q9UMQ3 279 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 LRRIQ3A6PVS8 624 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 GOLGA6L22H0YM25 854 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 H3BQ06 376 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 IKBKBO14920 756 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ADAM12O43184 909 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 TGM5O43548 720 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ITGB3P05106 788 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 CYP11A1P05108 521 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 TMEM191BP0C7N4 346 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 DLATP10515 647 aaKnown RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 BMP1P13497 986 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 EPCAMP16422 314 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 HOXB8P17481 243 aaPredicted RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 RPL17P18621 184 aaKnown RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 TNNI1P19237 187 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 TYMPP19971 482 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 KLRC2P26717 231 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 POLR2BP30876 1174 aaKnown RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 SCN1AP35498 2009 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 PNPLA4P41247 253 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 TAF6P49848 677 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 DLG4P78352 724 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 MRPS5P82675 430 aaKnown RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 FKBP3Q00688 224 aaKnown RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 RAB33AQ14088 237 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 AAK1Q2M2I8 961 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ANKRD40Q6AI12 368 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 DESI1Q6ICB0 168 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ANKRD54Q6NXT1 300 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 C15orf39Q6ZRI6 1047 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 RBM43Q6ZSC3 357 aaKnown RBP6.67□□□□□ -1.34
CNOT1-204ENST00000563130 TRAPPC11Q7Z392 1133 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 LIMS2Q7Z4I7 341 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 APPL2Q8NEU8 664 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 ANKRD36BP1Q96IX9 119 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 SENP8Q96LD8 212 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 FNBP1Q96RU3 617 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 S1PR5Q9H228 398 aa6.67□□□□□ -1.34
CNOT1-204ENST00000563130 TRIM49BA6NDI0 452 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 KPNA7A9QM74 516 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 BIN1O00499 593 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 PSMA7O14818 248 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 ABLIM3O94929 683 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 STAU1O95793 577 aaKnown RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 GLUD1P00367 558 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 CST3P01034 146 aaPredicted RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 C4BPAP04003 597 aaKnown RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 SRGAP2BP0DMP2 458 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 CA8P35219 290 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 PSMC2P35998 433 aaKnown RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 KCNQ1P51787 676 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 AP3M2P53677 418 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 RBP5P82980 135 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 QPCTQ16769 361 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 CEP135Q66GS9 1140 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 TTI2Q6NXR4 508 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 INTS8Q75QN2 995 aaKnown RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 CSGALNACT2Q8N6G5 542 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 HDAC7Q8WUI4 952 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 SUSD6Q92537 303 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 ZNF560Q96MR9 790 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 MED15Q96RN5 788 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 DUSP9Q99956 384 aaKnown RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 NUP62CLQ9H1M0 184 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 GDAP2Q9NXN4 497 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 FBXL5Q9UKA1 691 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 AGAP1Q9UPQ3 857 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 FRMD4BQ9Y2L6 1034 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 CDY1Q9Y6F8 540 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 CETN3O15182 167 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 MBTPS2O43462 519 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 TNNC2P02585 160 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 OR1D2P34982 312 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 ROR1Q01973 937 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 YWHAHQ04917 246 aaPredicted RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 BFSP1Q12934 665 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 STIM1Q13586 685 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 SMAD2Q15796 467 aaKnown RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 ZACNQ401N2 412 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 SV2CQ496J9 727 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 TDRD10Q5VZ19 366 aaKnown RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 ZNF280DQ6N043 979 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 LLGL2Q6P1M3 1020 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 DSTYKQ6XUX3 929 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 FAM186BQ8IYM0 893 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 ZNF461Q8TAF7 563 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 EEF2KMTQ96G04 330 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 OXCT2Q9BYC2 517 aaPredicted RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 RHOBTB2Q9BYZ6 727 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 XYLT2Q9H1B5 865 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 PLEKHA4Q9H4M7 779 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 VRTNQ9H8Y1 702 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 DZANK1Q9NVP4 752 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 CD207Q9UJ71 328 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 FBXW11Q9UKB1 542 aa6.66□□□□□ -1.34
CNOT1-204ENST00000563130 FCF1Q9Y324 198 aaKnown RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 TIMM13Q9Y5L4 95 aaPredicted RBP6.66□□□□□ -1.34
CNOT1-204ENST00000563130 MUC3AQ02505 3323 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms