RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SLC51AQ86UW1 340 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 BRI3BPQ8WY22 251 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 DERAQ9Y315 318 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 AP3B1O00203 1094 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 PARNO95453 639 aaKnown RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 CRYBB1P53674 252 aaPredicted RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 PLTPP55058 493 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 C4orf22Q6V702 233 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 BCORQ6W2J9 1755 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 NYAP1Q6ZVC0 841 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 SPATS2Q86XZ4 545 aaKnown RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 SLAIN1Q8ND83 568 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 USP33Q8TEY7 942 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 CAPNS2Q96L46 248 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 FTHL17Q9BXU8 183 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 PARD6BQ9BYG5 372 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 NOC2LQ9Y3T9 749 aaKnown RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 CPP00450 1065 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 MX2P20592 715 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 BMP6P22004 513 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 GYS2P54840 703 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 PPP6R3Q5H9R7 873 aaPredicted RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 LDLRAD1Q5T700 205 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 HSPH1Q92598 858 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 NMRK2Q9NPI5 230 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 CHST12Q9NRB3 414 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 SEPT10Q9P0V9 454 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 BARX2Q9UMQ3 279 aaPredicted RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 SIK3Q9Y2K2 1263 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 CAPN7Q9Y6W3 813 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 MYH13Q9UKX3 1938 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 ZNF536O15090 1300 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 F8W8V4 182 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 CXCL8P10145 99 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 HIRAP54198 1017 aaPredicted RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 MRPS6P82932 125 aaKnown RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 PTPN11Q06124 597 aaPredicted RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 ARSHQ5FYA8 562 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 CC2D1AQ6P1N0 951 aaPredicted RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 C16orf87Q6PH81 154 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 VCX3BQ9H321 246 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 VCX3AQ9NNX9 186 aa7.95□□□□□ -1.14
TCF4-216ENST00000562680 AVENQ9NQS1 362 aaPredicted RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 PRDM5Q9NQX1 630 aaPredicted RBP7.95□□□□□ -1.14
TCF4-216ENST00000562680 A0A087X0T9 212 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 USP27XA6NNY8 438 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 PSTPIP1O43586 416 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 WEE2P0C1S8 567 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 FAM228BP0C875 321 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 GPD1P21695 349 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 KLK7P49862 253 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 ARL4CP56559 192 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 ZBTB16Q05516 673 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 DGKZQ13574 1117 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 SNCBQ16143 134 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 SLC35G1Q2M3R5 365 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 UNC93AQ86WB7 457 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 ZDHHC17Q8IUH5 632 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 TMEM86AQ8N2M4 240 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 PDCD7Q8N8D1 485 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 COPS5Q92905 334 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 EXOC4Q96A65 974 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 RSAD1Q9HA92 442 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 RRN3Q9NYV6 651 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 F9P00740 461 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 MMP3P08254 477 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 FLT3LGP49771 235 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 LIG3P49916 1009 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 NDUFAF2Q8N183 169 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 SPATA4Q8NEY3 305 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 LENG9Q96B70 501 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 UROC1Q96N76 676 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 PI4K2AQ9BTU6 479 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 KCND1Q9NSA2 647 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 CISHQ9NSE2 258 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 ARHGAP28Q9P2N2 729 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 WNK3Q9BYP7 1800 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 ATP1A1P05023 1023 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 INHBAP08476 426 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 SLC2A3P11169 496 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 HPDP32754 393 aaPredicted RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 MYL6P60660 151 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 YWHAGP61981 247 aaKnown RBP eCLIP7.94□□□□□ -1.14
TCF4-216ENST00000562680 DYNLT1P63172 113 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 DHX9Q08211 1270 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 ITKQ08881 620 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 LAMB3Q13751 1172 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 GOLGA7BQ2TAP0 167 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 PHLDB2Q86SQ0 1253 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 ATL2Q8NHH9 583 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.94□□□□□ -1.14
TCF4-216ENST00000562680 TMEM169Q96HH4 297 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 TTC1Q99614 292 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 ACO2Q99798 780 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 CELF4Q9BZC1 486 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 PPANQ9NQ55 473 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 PTPN22Q9Y2R2 807 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 LAMB2P55268 1798 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 KLHL33A6NCF5 533 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms