RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 LRSAM1Q6UWE0 723 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 PALB2Q86YC2 1186 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 ADGRF2Q8IZF7 708 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 SLC22A17Q8WUG5 538 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 HDAC7Q8WUI4 952 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 SEMA4DQ92854 862 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 PABPC5Q96DU9 382 aaKnown RBP17.53■□□□□ 0.4
USB1-206ENST00000562534 ACBD6Q9BR61 282 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 PI4K2AQ9BTU6 479 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 SNX25Q9H3E2 840 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 NDST4Q9H3R1 872 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 MAFFQ9ULX9 164 aa17.53■□□□□ 0.4
USB1-206ENST00000562534 PRRC2BQ5JSZ5 2229 aaKnown RBP17.53■□□□□ 0.4
USB1-206ENST00000562534 COL4A4P53420 1690 aaPredicted RBP17.52■□□□□ 0.4
USB1-206ENST00000562534 GTPBP10A4D1E9 387 aaKnown RBP17.52■□□□□ 0.4
USB1-206ENST00000562534 GLUD1P00367 558 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 WARSP23381 471 aaKnown RBP17.52■□□□□ 0.4
USB1-206ENST00000562534 PCSK1P29120 753 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 GTF2F1P35269 517 aaKnown RBP eCLIP17.52■□□□□ 0.4
USB1-206ENST00000562534 TPM4P67936 248 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 NOP14P78316 857 aaKnown RBP17.52■□□□□ 0.4
USB1-206ENST00000562534 SMARCB1Q12824 385 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 KCNC3Q14003 757 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 COL19A1Q14993 1142 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 IQCB1Q15051 598 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 TPGS2Q68CL5 300 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 RSPO2Q6UXX9 243 aaPredicted RBP17.52■□□□□ 0.4
USB1-206ENST00000562534 RTL10Q7L3V2 364 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 GLYCTKQ8IVS8 523 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 DHX40Q8IX18 779 aaKnown RBP17.52■□□□□ 0.4
USB1-206ENST00000562534 TTC39CQ8N584 583 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 CASP10Q92851 521 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 PLEKHA4Q9H4M7 779 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 FAM124BQ9H5Z6 455 aaPredicted RBP17.52■□□□□ 0.4
USB1-206ENST00000562534 CYP3A43Q9HB55 503 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 DDX43Q9NXZ2 648 aaKnown RBP17.52■□□□□ 0.4
USB1-206ENST00000562534 HCFC2Q9Y5Z7 792 aa17.52■□□□□ 0.4
USB1-206ENST00000562534 MYO7AQ13402 2215 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.51■□□□□ 0.39
USB1-206ENST00000562534 TGM5O43548 720 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 ABLIM3O94929 683 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 ZNF18P17022 549 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 ARPP19P56211 112 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 GPR17Q13304 367 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 GBP6Q6ZN66 633 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 DCP1BQ8IZD4 617 aaKnown RBP17.51■□□□□ 0.39
USB1-206ENST00000562534 OR6B3Q8NGW1 331 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 HLA-CQ95604 372 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 ANP32EQ9BTT0 268 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 DNAI2Q9GZS0 605 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 TSPY26PQ9H489 355 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 CBX8Q9HC52 389 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 CLDND1Q9NY35 253 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 LIMA1Q9UHB6 759 aaKnown RBP17.51■□□□□ 0.39
USB1-206ENST00000562534 POLIQ9UNA4 740 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 COG5Q9UP83 839 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 SZT2Q5T011 3432 aa17.51■□□□□ 0.39
USB1-206ENST00000562534 ADAM12O43184 909 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 CPB1P15086 417 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 ATF2P15336 505 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 HOXB8P17481 243 aaPredicted RBP17.5■□□□□ 0.39
USB1-206ENST00000562534 ELF1P32519 619 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 ZNF445P59923 1031 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 TSPY1Q01534 308 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 ROR1Q01973 937 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 UVSSAQ2YD98 709 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 MIIPQ5JXC2 388 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 SPOPLQ6IQ16 392 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 EP400NLQ6ZTU2 488 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 LMO3Q8TAP4 145 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 KBTBD7Q8WVZ9 684 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 TATDN2Q93075 761 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 NT5C1BQ96P26 610 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 RTP3Q9BQQ7 232 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 MRPL45Q9BRJ2 306 aaKnown RBP17.5■□□□□ 0.39
USB1-206ENST00000562534 BCO2Q9BYV7 579 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 NIF3L1Q9GZT8 377 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 ZCWPW1Q9H0M4 648 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 APOBEC3GQ9HC16 384 aaKnown RBP17.5■□□□□ 0.39
USB1-206ENST00000562534 CDH9Q9ULB4 789 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 TRANK1O15050 2925 aa17.5■□□□□ 0.39
USB1-206ENST00000562534 GOLGA6L19H0YKK7 550 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 PES1O00541 588 aaKnown RBP17.49■□□□□ 0.39
USB1-206ENST00000562534 LRRN2O75325 713 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 WEE2P0C1S8 567 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 EPCAMP16422 314 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 TRIM21P19474 475 aaKnown RBP17.49■□□□□ 0.39
USB1-206ENST00000562534 TBXAS1P24557 533 aaPredicted RBP17.49■□□□□ 0.39
USB1-206ENST00000562534 LMO2P25791 158 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 ASPAP45381 313 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 CDH8P55286 799 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 KRT31Q15323 416 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 MAPRE1Q15691 268 aaKnown RBP17.49■□□□□ 0.39
USB1-206ENST00000562534 EXOC3L4Q17RC7 722 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 LLGL2Q6P1M3 1020 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 UNC93AQ86WB7 457 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 KREMEN2Q8NCW0 462 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 FAM200AQ8TCP9 573 aa17.49■□□□□ 0.39
USB1-206ENST00000562534 C2orf15Q8WU43 125 aaKnown RBP17.49■□□□□ 0.39
USB1-206ENST00000562534 ELMO3Q96BJ8 720 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms