RNA–Protein interactions for RNA: ENST00000562411.5

SNAPC5-204, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 3

Gene SNAPC5, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-204ENST00000562411 PIK3CAP42336 1068 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 VAMP7P51809 220 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 PMS1P54277 932 aaKnown RBP11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 TNNC1P63316 161 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 ADAM9Q13443 819 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 MORC3Q14149 939 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 ZNF699Q32M78 642 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 SCARA5Q6ZMJ2 495 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 CLEC17AQ6ZS10 378 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 INTS8Q75QN2 995 aaKnown RBP11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 TTC9BQ8N6N2 239 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 TOP6BLQ8N6T0 577 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 TMC2Q8TDI7 906 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 TMEM174Q8WUU8 243 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 ZNF516Q92618 1163 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 BORCS6Q96GS4 357 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 RTP3Q9BQQ7 232 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 OXCT2Q9BYC2 517 aaPredicted RBP11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 AFF4Q9UHB7 1163 aaKnown RBP11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 NR2E1Q9Y466 385 aa11.76□□□□□ -0.53
SNAPC5-204ENST00000562411 GOLGA6L22H0YM25 854 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 CETN3O15182 167 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 MAPK13O15264 365 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 SLC16A3O15427 465 aaKnown RBP11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 HCRTO43612 131 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 VNN2O95498 520 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 BMP6P22004 513 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 ACAT1P24752 427 aaKnown RBP11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 GBP2P32456 591 aaPredicted RBP11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 PPP1R2P41236 205 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 AP3M2P53677 418 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 MYL6P60660 151 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 NTHL1P78549 312 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 MYL7Q01449 175 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 TSPY1Q01534 308 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 LRRC63Q05C16 580 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 NCOA4Q13772 614 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 CCDC142Q17RM4 750 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 DCAF17Q5H9S7 520 aaPredicted RBP11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 CENPPQ6IPU0 288 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 CYP26C1Q6V0L0 522 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 GRASPQ7Z6J2 395 aaPredicted RBP11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 OSTM1Q86WC4 334 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 TCEAL8Q8IYN2 117 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 THEM5Q8N1Q8 247 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 TMEM86AQ8N2M4 240 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 NELFBQ8WX92 580 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 ELMO3Q96BJ8 720 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 MMS19Q96T76 1030 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 SEPT5Q99719 369 aaPredicted RBP11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 ZCWPW1Q9H0M4 648 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 NUP62CLQ9H1M0 184 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 LMBRD1Q9NUN5 540 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 HCFC1R1Q9NWW0 138 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 GDAP2Q9NXN4 497 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 DDX43Q9NXZ2 648 aaKnown RBP11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 PTPRDP23468 1912 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 DOCK8Q8NF50 2099 aa11.75□□□□□ -0.53
SNAPC5-204ENST00000562411 OBSL1O75147 1896 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 DOCK6Q96HP0 2047 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 SOAT2O75908 522 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 VNN1O95497 513 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 POU2F2P09086 479 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 CCNE1P24864 410 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 GCLMP48507 274 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 CLDN10P78369 228 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 TWF1Q12792 350 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 PAK1Q13153 545 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 GPR17Q13304 367 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 SOWAHAQ2M3V2 549 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 WDR72Q3MJ13 1102 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 PABPC1LQ4VXU2 614 aaKnown RBP11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 C1orf220Q5T0J3 134 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 ANKRD40Q6AI12 368 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 ELMOD1Q8N336 334 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 KBTBD7Q8WVZ9 684 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 SYAP1Q96A49 352 aaPredicted RBP11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 MKNK1Q9BUB5 465 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 RHOBTB2Q9BYZ6 727 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 CRISPLD1Q9H336 500 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 SMYD3Q9H7B4 428 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 WDR6Q9NNW5 1121 aaKnown RBP11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 ABI2Q9NYB9 513 aaPredicted RBP11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 NXF1Q9UBU9 619 aaKnown RBP11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 MUTYHQ9UIF7 546 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 NOTCH4Q99466 2003 aa11.74□□□□□ -0.53
SNAPC5-204ENST00000562411 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 N4BP1O75113 896 aaKnown RBP11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 PAPLNO95428 1278 aa11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 CST3P01034 146 aaPredicted RBP11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 HLA-DRAP01903 254 aa11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 FSHRP23945 695 aa11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 RAP1GAPP47736 663 aa11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 MXI1P50539 228 aa11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 STX17P56962 302 aa11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 PSMC1P62191 440 aaKnown RBP11.73□□□□□ -0.53
SNAPC5-204ENST00000562411 PPP3CAQ08209 521 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms