RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 PNPLA4P41247 253 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 FOXO4P98177 505 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 POLD3Q15054 466 aaPredicted RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 PAN2Q504Q3 1202 aaKnown RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 PRR5LQ6MZQ0 368 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 SHC4Q6S5L8 630 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 PLD3Q8IV08 490 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 PCYOX1LQ8NBM8 494 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 HPDLQ96IR7 371 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 FAM167BQ9BTA0 163 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 PAK5Q9P286 719 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 PNMA8BQ9ULN7 279 aaPredicted RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 SMG5Q9UPR3 1016 aaKnown RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 NEU2Q9Y3R4 380 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 TBX3O15119 743 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 MAP3K13O43283 966 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 ADCY3O60266 1144 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 CCDC159P0C7I6 412 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 ERFP50548 548 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 POU4F1Q01851 419 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 GPAT2Q6NUI2 795 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 PRMT1Q99873 361 aaKnown RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 WWOXQ9NZC7 414 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 MARCOQ9UEW3 520 aaPredicted RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 SLC39A10Q9ULF5 831 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 CHMP2BQ9UQN3 213 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 FHOD1Q9Y613 1164 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 ARHGAP31Q2M1Z3 1444 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 HNRNPRO43390 633 aaKnown RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 RNASEH1O60930 286 aaKnown RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 DAB1O75553 588 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 MBL2P11226 248 aaPredicted RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 PCYT1AP49585 367 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 MAGEB10Q96LZ2 347 aaPredicted RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 PNKPQ96T60 521 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 MXRA8Q9BRK3 442 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 METTL5Q9NRN9 209 aaKnown RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 KLK14Q9P0G3 267 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 ATP11BQ9Y2G3 1177 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 C16orf96A6NNT2 1141 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 TCP11X1B4DZS4 312 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 EXTL3O43909 919 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 SERPINI2O75830 405 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 ASS1P00966 412 aaKnown RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 SLC16A1P53985 500 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 GALCP54803 685 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 NCKAP1LP55160 1127 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 KCNK10P57789 538 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 MAPRE1Q15691 268 aaKnown RBP11.74□□□□□ -0.53
RPAP1-204ENST00000562303 ANKS6Q68DC2 871 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 DPF3Q92784 378 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 TRIM9Q9C026 710 aa11.74□□□□□ -0.53
RPAP1-204ENST00000562303 EVPLLA8MZ36 301 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 TRIM65Q6PJ69 517 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 HHIPL2Q6UWX4 724 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 SPATA21Q7Z572 469 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 CYGBQ8WWM9 190 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 VMP1Q96GC9 406 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 RSAD1Q9HA92 442 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 PSMC3IPQ9P2W1 217 aaPredicted RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 COPG1Q9Y678 874 aaKnown RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 EIF4E1BA6NMX2 242 aaKnown RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 F8W810 466 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 NDUFB5O43674 189 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 GTF2H1P32780 548 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 TBL3Q12788 808 aaKnown RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 TNS3Q68CZ2 1445 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 FAM180AQ6UWF9 173 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 OLFM3Q96PB7 478 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 OSBPL1AQ9BXW6 950 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 TMEM39BQ9GZU3 492 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 IPPQ9Y573 584 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 CRB1P82279 1406 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 CYTH3O43739 400 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 APOA4P06727 396 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 ITIH2P19823 946 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 PTPN7P35236 360 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 TCF7P36402 384 aaPredicted RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 GTF2A2P52657 109 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 PTK7Q13308 1070 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 BYSLQ13895 437 aaKnown RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 ANGPT1Q15389 498 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 CNGA3Q16281 694 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 CCDC142Q17RM4 750 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 TTLL9Q3SXZ7 439 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 ZC2HC1CQ53FD0 456 aaPredicted RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 NAPEPLDQ6IQ20 393 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 UGT3A1Q6NUS8 523 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 C16orf89Q6UX73 402 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 MRPS31Q92665 395 aaKnown RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 NIF3L1Q9GZT8 377 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 DEFB129Q9H1M3 183 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 NPHS2Q9NP85 383 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 NMRK2Q9NPI5 230 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 NFKBIL1Q9UBC1 381 aaPredicted RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 CAB39Q9Y376 341 aaPredicted RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 FAM47DPA6NHR8 397 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms