RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 XXYLT1Q8NBI6 393 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 FBXO15Q8NCQ5 510 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 SMC1BQ8NDV3 1235 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 OR8K3Q8NH51 312 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 FAM216AQ8WUB2 273 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 ATP6V0A1Q93050 837 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 PHACTR3Q96KR7 559 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 RUNDC3BQ96NL0 473 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 PRAM1Q96QH2 718 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 TARS2Q9BW92 718 aaKnown RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 MTMR12Q9C0I1 747 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 NYXQ9GZU5 481 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 PUS7LQ9H0K6 701 aaKnown RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 SIL1Q9H173 461 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 ZNF277Q9NRM2 450 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 SPTLC3Q9NUV7 552 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 GGA3Q9NZ52 723 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 KANSL3Q9P2N6 904 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 BAG5Q9UL15 447 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 CNOT6Q9ULM6 557 aaKnown RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 RAXQ9Y2V3 346 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 AOX1Q06278 1338 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 WDR33Q9C0J8 1336 aaKnown RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 CPS1P31327 1500 aa5.87□□□□□ -1.47
CAPN3-211ENST00000562199 XRN1Q8IZH2 1706 aaKnown RBP5.87□□□□□ -1.47
CAPN3-211ENST00000562199 TOPAZ1Q8N9V7 1692 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 TTC41PQ6P2S7 1318 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 WDR19Q8NEZ3 1342 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 EME2A4GXA9 379 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 CAPN14A8MX76 684 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 KRIT1O00522 736 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 AP3D1O14617 1153 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 MAGEB3O15480 346 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 ZEB2O60315 1214 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 SMPD2O60906 423 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 AOC2O75106 756 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 ECDO95905 644 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 S100A9P06702 114 aaKnown RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 ADRB2P07550 413 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 POU2F2P09086 479 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 SRGAP2BP0DMP2 458 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 PF4V1P10720 104 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 MYCLP12524 364 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 ACTN1P12814 892 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 VAV1P15498 845 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 MPSTP25325 297 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 GDI1P31150 447 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 CYP2C19P33261 490 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 PSMC2P35998 433 aaKnown RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 IL6STP40189 918 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 HNMTP50135 292 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 PLCD1P51178 756 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 PMS2P54278 862 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 USP14P54578 494 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 VCPP55072 806 aaKnown RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 HAND2P61296 217 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 TFAP4Q01664 338 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 PPARDQ03181 441 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 SLC14A1Q13336 389 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 BYSLQ13895 437 aaKnown RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 SNCBQ16143 134 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 ERCC6LQ2NKX8 1250 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 ALG11Q2TAA5 492 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 Q3ZCU0 254 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 LRRC23Q53EV4 343 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 PRR16Q569H4 304 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 XKR9Q5GH70 373 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 TWF2Q6IBS0 349 aaKnown RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 MIS18BP1Q6P0N0 1132 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 TMEM53Q6P2H8 277 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 C6orf89Q6UWU4 347 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 PDZD4Q76G19 769 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 SPATC1Q76KD6 591 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 NLRP9Q7RTR0 991 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 MAMDC2Q7Z304 686 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 MFN1Q8IWA4 741 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 CD302Q8IX05 232 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 C16orf71Q8IYS4 520 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 CNTD1Q8N815 330 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 SYT2Q8N9I0 419 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 ANKRD52Q8NB46 1076 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 TOR1AIP2Q8NFQ8 470 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 CEP76Q8TAP6 659 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 IFI44Q8TCB0 444 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 BCAS4Q8TDM0 211 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 CPLX3Q8WVH0 158 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 ATP2A3Q93084 1043 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 SNF8Q96H20 258 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 VPS50Q96JG6 964 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 CCDC138Q96M89 665 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 FAM193BQ96PV7 902 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 YME1L1Q96TA2 773 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 DDX50Q9BQ39 737 aaKnown RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 PBX4Q9BYU1 374 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 DENND2DQ9H6A0 471 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-211ENST00000562199 ELP3Q9H9T3 547 aa5.86□□□□□ -1.47
CAPN3-211ENST00000562199 FANCEQ9HB96 536 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms