RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 KIF20AO95235 890 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 CHEK2O96017 543 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 IGLV2-14P01704 120 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 AHSGP02765 367 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 ALDH2P05091 517 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 GNAI3P08754 354 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 PDGFRBP09619 1106 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 PF4V1P10720 104 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 PPP3CBP16298 524 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 IBSPP21815 317 aaPredicted RBP3.04□□□□□ -1.92
CHD9-204ENST00000561869 NPTX2P47972 431 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 ZNF135P52742 658 aaPredicted RBP3.04□□□□□ -1.92
CHD9-204ENST00000561869 MAPK10P53779 464 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 GNAI1P63096 354 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 PLS1Q14651 629 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 TTF1Q15361 905 aaPredicted RBP3.04□□□□□ -1.92
CHD9-204ENST00000561869 TXNRD1Q16881 649 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 ERCC6LQ2NKX8 1250 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 SLC30A10Q6XR72 485 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 RD3Q7Z3Z2 195 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 USP37Q86T82 979 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 FAM9AQ8IZU1 332 aaPredicted RBP3.04□□□□□ -1.92
CHD9-204ENST00000561869 FAM109AQ8N4B1 249 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 BOLLQ8N9W6 283 aaKnown RBP3.04□□□□□ -1.92
CHD9-204ENST00000561869 PLBD2Q8NHP8 589 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 SNX19Q92543 992 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 SMOQ99835 787 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 DUSP26Q9BV47 211 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 RTFDC1Q9BY42 306 aaPredicted RBP3.04□□□□□ -1.92
CHD9-204ENST00000561869 AMBRA1Q9C0C7 1298 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 TINAGL1Q9GZM7 467 aaPredicted RBP3.04□□□□□ -1.92
CHD9-204ENST00000561869 SLAMF7Q9NQ25 335 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 AASDHPPTQ9NRN7 309 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 LMBRD1Q9NUN5 540 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 GNL3LQ9NVN8 582 aaKnown RBP3.04□□□□□ -1.92
CHD9-204ENST00000561869 PNPOQ9NVS9 261 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 PTGFRNQ9P2B2 879 aa3.04□□□□□ -1.92
CHD9-204ENST00000561869 ARHGEF17Q96PE2 2063 aaPredicted RBP3.04□□□□□ -1.92
CHD9-204ENST00000561869 ADGRA2Q96PE1 1338 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 LRRC3CA6NJW4 275 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 AKAP10O43572 662 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 HDCP19113 662 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 VCAM1P19320 739 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 ITPKBP27987 946 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 NDUFV1P49821 464 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 ELLP55199 621 aaPredicted RBP3.03□□□□□ -1.92
CHD9-204ENST00000561869 NXPH1P58417 271 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 C21orf58P58505 322 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 NHLH1Q02575 133 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 ZNF267Q14586 743 aaPredicted RBP3.03□□□□□ -1.92
CHD9-204ENST00000561869 CCDC142Q17RM4 750 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 NBPF8Q3BBV2 869 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 EMC10Q5UCC4 262 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 KAZNQ674X7 775 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 PEG10Q86TG7 708 aaKnown RBP3.03□□□□□ -1.92
CHD9-204ENST00000561869 SH2D3CQ8N5H7 860 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 CELF5Q8N6W0 485 aaKnown RBP3.03□□□□□ -1.92
CHD9-204ENST00000561869 PSD4Q8NDX1 1056 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 TOR1AIP2Q8NFQ8 470 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 TFAP2BQ92481 460 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 TNPO1Q92973 898 aaKnown RBP3.03□□□□□ -1.92
CHD9-204ENST00000561869 FBXL20Q96IG2 436 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 PGBD1Q96JS3 809 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 FAM167AQ96KS9 214 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 PUS7Q96PZ0 661 aaKnown RBP3.03□□□□□ -1.92
CHD9-204ENST00000561869 OSBPL9Q96SU4 736 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 CGRRF1Q99675 332 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 TIMP4Q99727 224 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 CNPPD1Q9BV87 410 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 KLK15Q9H2R5 256 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 IL17RBQ9NRM6 502 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.03□□□□□ -1.92
CHD9-204ENST00000561869 SLC17A6Q9P2U8 582 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 FEZ2Q9UHY8 353 aaPredicted RBP3.03□□□□□ -1.92
CHD9-204ENST00000561869 PCDHA1Q9Y5I3 950 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.03□□□□□ -1.92
CHD9-204ENST00000561869 ENTPD2Q9Y5L3 495 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 NR2E3Q9Y5X4 410 aa3.03□□□□□ -1.92
CHD9-204ENST00000561869 SPATA31A6Q5VVP1 1343 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 hCG_2014768A0A024R1R8 64 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 A0A0B4J269 797 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 F5H697 171 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 MASP2O00187 686 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 VPS4BO75351 444 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 DNAJB5O75953 348 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 CHRM2P08172 466 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 LMO1P25800 156 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 GRIA3P42263 894 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 RAB27AP51159 221 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 ANAPC15P60006 121 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 EXOSC9Q06265 439 aaKnown RBP3.02□□□□□ -1.93
CHD9-204ENST00000561869 TUBB3Q13509 450 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 PIN1Q13526 163 aaPredicted RBP3.02□□□□□ -1.93
CHD9-204ENST00000561869 PREPLQ4J6C6 727 aaPredicted RBP3.02□□□□□ -1.93
CHD9-204ENST00000561869 B3GNT9Q6UX72 402 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 DIS3LQ8TF46 1054 aaKnown RBP3.02□□□□□ -1.93
CHD9-204ENST00000561869 RFKQ969G6 155 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 C1GALT1C1Q96EU7 318 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 CAMKK2Q96RR4 588 aa3.02□□□□□ -1.93
CHD9-204ENST00000561869 KIAA1586Q9HCI6 787 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms