RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ANKFY1Q9P2R3 1169 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 GNPTGQ9UJJ9 305 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 CDH7Q9ULB5 785 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 COQ6Q9Y2Z9 468 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 NCANO14594 1321 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 SYNGAP1Q96PV0 1343 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 PAPPAQ13219 1627 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 SHANK3Q9BYB0 1731 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 ECM29Q5VYK3 1845 aa7.66□□□□□ -1.18
CDH1-203ENST00000561751 A0A087X0T9 212 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 FUOMA2VDF0 154 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 TRIM49BA6NDI0 452 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 TTC34A8MYJ7 566 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 RASA4BC9J798 803 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 FAM47E-STBD1D6RA91 191 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 HGSO14964 777 aaPredicted RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 KMOO15229 486 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 ALOX15BO15296 676 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 RASA4O43374 803 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 SLC26A4O43511 780 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 ADCY3O60266 1144 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 TLR2O60603 784 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 EXOC3O60645 756 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 CNOT3O75175 753 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 SPAG7O75391 227 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 MTRF1O75570 445 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 IGKV5-2P06315 115 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 H2AFZP0C0S5 128 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 MSL3P1P0C860 447 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 SPATA31D3P0C874 917 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 FAM228BP0C875 321 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 PCP11498 1178 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 KRT4P19013 534 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 HMOX2P30519 316 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 TTKP33981 857 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 PGM1P36871 562 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 EPS15P42566 896 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 VPS41P49754 854 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 KLK7P49862 253 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 GALK1P51570 392 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 PLTPP55058 493 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 RPS3AP61247 264 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 PPATQ06203 517 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 CALCOCO2Q13137 446 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 MSLNQ13421 630 aaPredicted RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 PDK3Q15120 406 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 DLGAP5Q15398 846 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 PARP10Q53GL7 1025 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 TAF1BQ53T94 588 aaPredicted RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 TDRD12Q587J7 1177 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 AKAP4Q5JQC9 854 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 KIAA1841Q6NSI8 718 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 TTC23LQ6PF05 361 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 RBM44Q6ZP01 1051 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 SPATA31D4Q6ZUB0 917 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 H2AFVQ71UI9 128 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 ANO5Q75V66 913 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 EPM2AIP1Q7L775 607 aaPredicted RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 ZNF410Q86VK4 478 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 KBTBD2Q8IY47 623 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 CCDC89Q8N998 374 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 FBXO25Q8TCJ0 367 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 VTI1AQ96AJ9 217 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 ALKBH8Q96BT7 664 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 NMD3Q96D46 503 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 CDK5RAP3Q96JB5 506 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 MIPEPQ99797 713 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 CTRCQ99895 268 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 STK33Q9BYT3 514 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 VPS11Q9H270 941 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 BLZF1Q9H2G9 400 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 RNF41Q9H4P4 317 aaPredicted RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 KCNK9Q9NPC2 374 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 ATAD3AQ9NVI7 634 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 GID8Q9NWU2 228 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 TAS2R1Q9NYW7 299 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 CLIC5Q9NZA1 410 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 IGSF9Q9P2J2 1179 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 DBR1Q9UK59 544 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 CDV3Q9UKY7 258 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 CNOT11Q9UKZ1 510 aaKnown RBP7.65□□□□□ -1.18
CDH1-203ENST00000561751 TSC22D4Q9Y3Q8 395 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 SPO11Q9Y5K1 396 aa7.65□□□□□ -1.18
CDH1-203ENST00000561751 LTN1O94822 1766 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 TIAM2Q8IVF5 1701 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 PFASO15067 1338 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 PCDH11YQ9BZA8 1340 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 A0A087WZG4 1122 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 EIF4E1BA6NMX2 242 aaKnown RBP7.64□□□□□ -1.19
CDH1-203ENST00000561751 IDH1O75874 414 aaKnown RBP7.64□□□□□ -1.19
CDH1-203ENST00000561751 CAPNS1P04632 268 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 TMEM253P0C7T8 217 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 SMIM18P0DKX4 95 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 ESRRAP11474 423 aaPredicted RBP7.64□□□□□ -1.19
CDH1-203ENST00000561751 GNAT2P19087 354 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 CASP1P29466 404 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 FOXN2P32314 431 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 GRIA2P42262 883 aa7.64□□□□□ -1.19
CDH1-203ENST00000561751 CTSOP43234 321 aaPredicted RBP7.64□□□□□ -1.19
CDH1-203ENST00000561751 NOP14P78316 857 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms