RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 YIPF1Q9Y548 306 aa27.35■■□□□ 1.97
NME3-202ENST00000561637 SOAT2O75908 522 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 GJA1P17302 382 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 PTPN2P17706 415 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 TYMPP19971 482 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 DNM1Q05193 864 aaKnown RBP27.34■■□□□ 1.97
NME3-202ENST00000561637 TSSK4Q6SA08 328 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 BRSK2Q8IWQ3 736 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 SYCP3Q8IZU3 236 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 NOC3LQ8WTT2 800 aaKnown RBP27.34■■□□□ 1.97
NME3-202ENST00000561637 ATRIPQ8WXE1 791 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 TSPAN18Q96SJ8 248 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 OSBPL6Q9BZF3 934 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 PCDHA7Q9UN72 937 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 EXOC7Q9UPT5 735 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 PCDHB13Q9Y5F0 798 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 PCDHGA2Q9Y5H1 932 aa27.34■■□□□ 1.97
NME3-202ENST00000561637 MOSPD3O75425 235 aa27.33■■□□□ 1.97
NME3-202ENST00000561637 CCDC65Q8IXS2 484 aa27.33■■□□□ 1.97
NME3-202ENST00000561637 ATAD1Q8NBU5 361 aa27.33■■□□□ 1.97
NME3-202ENST00000561637 BORCS6Q96GS4 357 aa27.33■■□□□ 1.97
NME3-202ENST00000561637 TNMDQ9H2S6 317 aa27.33■■□□□ 1.97
NME3-202ENST00000561637 SMG5Q9UPR3 1016 aaKnown RBP27.33■■□□□ 1.97
NME3-202ENST00000561637 SLC27A5Q9Y2P5 690 aa27.33■■□□□ 1.97
NME3-202ENST00000561637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.32■■□□□ 1.96
NME3-202ENST00000561637 OR6C75A6NL08 312 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 LILRB5O75023 590 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 ODC1P11926 461 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 TGM1P22735 817 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 ASIC1P78348 528 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 DUSP4Q13115 394 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 POSTNQ15063 836 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 MTSS1LQ765P7 747 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 GRAMD1CQ8IYS0 662 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 NELL1Q92832 810 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 ZSWIM3Q96MP5 696 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 DNAJC25Q9H1X3 360 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 AVENQ9NQS1 362 aaPredicted RBP27.32■■□□□ 1.96
NME3-202ENST00000561637 ZSCAN32Q9NX65 697 aa27.32■■□□□ 1.96
NME3-202ENST00000561637 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.32■■□□□ 1.96
NME3-202ENST00000561637 DCDC2BA2VCK2 349 aa27.31■■□□□ 1.96
NME3-202ENST00000561637 MTMR11A4FU01 709 aa27.31■■□□□ 1.96
NME3-202ENST00000561637 FCARP24071 287 aa27.31■■□□□ 1.96
NME3-202ENST00000561637 TARSP26639 723 aaKnown RBP27.31■■□□□ 1.96
NME3-202ENST00000561637 TFAMQ00059 246 aaKnown RBP27.31■■□□□ 1.96
NME3-202ENST00000561637 GPR17Q13304 367 aa27.31■■□□□ 1.96
NME3-202ENST00000561637 WSCD1Q658N2 575 aa27.31■■□□□ 1.96
NME3-202ENST00000561637 LMBRD2Q68DH5 695 aaPredicted RBP27.31■■□□□ 1.96
NME3-202ENST00000561637 TANGO2Q6ICL3 276 aa27.31■■□□□ 1.96
NME3-202ENST00000561637 PYM1Q9BRP8 204 aaKnown RBP27.31■■□□□ 1.96
NME3-202ENST00000561637 EPC1Q9H2F5 836 aa27.31■■□□□ 1.96
NME3-202ENST00000561637 BLZF1Q9H2G9 400 aa27.31■■□□□ 1.96
NME3-202ENST00000561637 PDE11AQ9HCR9 933 aa27.31■■□□□ 1.96
NME3-202ENST00000561637 RBAKQ9NYW8 714 aaPredicted RBP27.31■■□□□ 1.96
NME3-202ENST00000561637 MAP1BP46821 2468 aaKnown RBP27.3■■□□□ 1.96
NME3-202ENST00000561637 CYB561D2O14569 222 aa27.3■■□□□ 1.96
NME3-202ENST00000561637 POLR2DO15514 142 aaKnown RBP27.3■■□□□ 1.96
NME3-202ENST00000561637 IL18RAPO95256 599 aa27.3■■□□□ 1.96
NME3-202ENST00000561637 MYL4P12829 197 aa27.3■■□□□ 1.96
NME3-202ENST00000561637 GARTP22102 1010 aa27.3■■□□□ 1.96
NME3-202ENST00000561637 ME1P48163 572 aa27.3■■□□□ 1.96
NME3-202ENST00000561637 CENPPQ6IPU0 288 aa27.3■■□□□ 1.96
NME3-202ENST00000561637 GPR161Q8N6U8 529 aaKnown RBP27.3■■□□□ 1.96
NME3-202ENST00000561637 C1orf127Q8N9H9 656 aa27.3■■□□□ 1.96
NME3-202ENST00000561637 CLDN23Q96B33 292 aa27.3■■□□□ 1.96
NME3-202ENST00000561637 ZFHX4Q86UP3 3567 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 CYP11A1P05108 521 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 SDHBP21912 280 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 POLR2BP30876 1174 aaKnown RBP27.29■■□□□ 1.96
NME3-202ENST00000561637 TAF6P49848 677 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 FZD5Q13467 585 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 ALCAMQ13740 583 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 FAM78AQ5JUQ0 283 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 PDZD4Q76G19 769 aaPredicted RBP27.29■■□□□ 1.96
NME3-202ENST00000561637 IQUBQ8NA54 791 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 CXorf38Q8TB03 319 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 LRRC3Q9BY71 257 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 PARD6AQ9NPB6 346 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 ZDHHC9Q9Y397 364 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 NCANO14594 1321 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 PTPRJQ12913 1337 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 TCHHQ07283 1943 aa27.29■■□□□ 1.96
NME3-202ENST00000561637 SHISA7A6NL88 538 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 EXTL3O43909 919 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 PFKPQ01813 784 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 POU5F1Q01860 360 aaKnown RBP27.28■■□□□ 1.96
NME3-202ENST00000561637 MYBPC2Q14324 1141 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 RESP18Q5W5W9 173 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 ARMCX5Q6P1M9 558 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 TPRG1Q6ZUI0 275 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 EPM2AIP1Q7L775 607 aaPredicted RBP27.28■■□□□ 1.96
NME3-202ENST00000561637 LRRTM3Q86VH5 581 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 TMC8Q8IU68 726 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 CBWD2Q8IUF1 395 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 SHKBP1Q8TBC3 707 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 ZNF512Q96ME7 567 aaPredicted RBP27.28■■□□□ 1.96
NME3-202ENST00000561637 CUEDC2Q9H467 287 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 ZNF334Q9HCZ1 680 aaPredicted RBP27.28■■□□□ 1.96
NME3-202ENST00000561637 GDE1Q9NZC3 331 aa27.28■■□□□ 1.96
NME3-202ENST00000561637 CDV3Q9UKY7 258 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms