RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 DNAI1Q9UI46 699 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 GINS2Q9Y248 185 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 DMXL1Q9Y485 3027 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 GVINP1Q7Z2Y8 2422 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 LACTBL1A8MY62 500 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 DDX3XO00571 662 aaKnown RBP eCLIP8.06□□□□□ -1.12
TPM1-231ENST00000561395 PHACTR2O75167 634 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 NPTXRO95502 500 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 ASS1P00966 412 aaKnown RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 TNNC2P02585 160 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 RPLP2P05387 115 aaKnown RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 TMEM191BP0C7N4 346 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 EIF4BP23588 611 aaKnown RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 GRM5P41594 1212 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 OSTNP61366 133 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 NOP14P78316 857 aaKnown RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 MRPS6P82932 125 aaKnown RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 TFAMQ00059 246 aaKnown RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 NCBP1Q09161 790 aaKnown RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 KIF5AQ12840 1032 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 COL19A1Q14993 1142 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 PTPROQ16827 1216 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 TCEAL5Q5H9L2 206 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 FAM117BQ6P1L5 589 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 CNKSR3Q6P9H4 555 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 SLC27A1Q6PCB7 646 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 TRIM67Q6ZTA4 783 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 RPAINQ86UA6 219 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 SERINC5Q86VE9 423 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 SLC30A5Q8TAD4 765 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 LNX1Q8TBB1 728 aaPredicted RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 EPS8L1Q8TE68 723 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 TMEM40Q8WWA1 233 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 ATOH1Q92858 354 aaPredicted RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 TATDN2Q93075 761 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 IRX2Q9BZI1 471 aaPredicted RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 APOBEC3GQ9HC16 384 aaKnown RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 ALG13Q9NP73 1137 aaKnown RBP8.06□□□□□ -1.12
TPM1-231ENST00000561395 CLDND1Q9NY35 253 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 ADAMTS1Q9UHI8 967 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 GUCA1BQ9UMX6 200 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 TFR2Q9UP52 801 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 TRIP11Q15643 1979 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 MYO10Q9HD67 2058 aa8.06□□□□□ -1.12
TPM1-231ENST00000561395 WDR87Q6ZQQ6 2873 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 DMDP11532 3685 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 PLXNA4Q9HCM2 1894 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 EFCAB14O75071 495 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 NFICP08651 508 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 TBXAS1P24557 533 aaPredicted RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 CASQ1P31415 396 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 USP8P40818 1118 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 TERF1P54274 439 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 PTPN11Q06124 597 aaPredicted RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 MGAT3Q09327 533 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 CUL2Q13617 745 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 NAB2Q15742 525 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 SMAD2Q15796 467 aaKnown RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 CLUL1Q15846 466 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 TCTN1Q2MV58 587 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 SLC10A6Q3KNW5 377 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 ZNF569Q5MCW4 686 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 JADE1Q6IE81 842 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 SPOPLQ6IQ16 392 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 ALKBH5Q6P6C2 394 aaKnown RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 ASCL5Q7RTU5 278 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 RSPH3Q86UC2 560 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 FAM228AQ86W67 206 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 NT5DC4Q86YG4 428 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 CD302Q8IX05 232 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 SLC35F6Q8N357 371 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 FBXL6Q8N531 539 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 SLC20A1Q8WUM9 679 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 DHX38Q92620 1227 aaKnown RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 SECISBP2LQ93073 1101 aaKnown RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 WNT8BQ93098 351 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 ELMO3Q96BJ8 720 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 ARID3AQ99856 593 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 AGPAT1Q99943 283 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 CCDC94Q9BW85 323 aaPredicted RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 EIF2AQ9BY44 585 aaKnown RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 CELF4Q9BZC1 486 aaKnown RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 IMPG2Q9BZV3 1241 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 NIF3L1Q9GZT8 377 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 IRF2BPLQ9H1B7 796 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 NSUN3Q9H649 340 aaKnown RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 ASB7Q9H672 318 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 NAGPAQ9UK23 515 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 NOCTQ9UK39 431 aaKnown RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 PIN4Q9Y237 131 aaKnown RBP8.05□□□□□ -1.12
TPM1-231ENST00000561395 NUB1Q9Y5A7 615 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 TRPV2Q9Y5S1 764 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 CDY2AQ9Y6F7 541 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 DUSP10Q9Y6W6 482 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 EPG5Q9HCE0 2579 aa8.05□□□□□ -1.12
TPM1-231ENST00000561395 ZNF292O60281 2723 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 ABHD14A-ACY1A0A1B0GW23 586 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 MACROD2A1Z1Q3 448 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 CTAGE9A4FU28 777 aa8.04□□□□□ -1.12
TPM1-231ENST00000561395 BTNL10A8MVZ5 291 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms