RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 DERAQ9Y315 318 aa29.25■■■□□ 2.27
SNRPA1-215ENST00000561187 GCNT3O95395 438 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 IDEP14735 1019 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 SYT1P21579 422 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 GABRR2P28476 465 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 ADSSP30520 456 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 ABCD1P33897 745 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 MAGEA9P43362 315 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 SOX9P48436 509 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 TAF6P49848 677 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 CYP4F8P98187 520 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 WSCD1Q658N2 575 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 CRELD2Q6UXH1 353 aaPredicted RBP29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 GAREM2Q75VX8 874 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 DNAJB7Q7Z6W7 309 aaPredicted RBP29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 MFSD6LQ8IWD5 586 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 FAM213AQ9BRX8 229 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 ST6GALNAC4Q9H4F1 302 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 C2CD2Q9Y426 696 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 SRPRBQ9Y5M8 271 aaKnown RBP29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 STYXL1Q9Y6J8 313 aa29.24■■■□□ 2.27
SNRPA1-215ENST00000561187 SLC38A8A6NNN8 435 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 MAN2B1O00754 1011 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 PPP1R37O75864 691 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 CCNE1P24864 410 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 CASP5P51878 434 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 GPR158Q5T848 1215 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 SV2BQ7L1I2 683 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 METTL23Q86XA0 190 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 GIPC2Q8TF65 315 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 PSMG2Q969U7 264 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 ZFYVE19Q96K21 471 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 FGFBP2Q9BYJ0 223 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 TRPV4Q9HBA0 871 aa29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 ABI2Q9NYB9 513 aaPredicted RBP29.23■■■□□ 2.27
SNRPA1-215ENST00000561187 CYP11A1P05108 521 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 ATF6P18850 670 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 RPS9P46781 194 aaKnown RBP29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 TFAMQ00059 246 aaKnown RBP29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 ZNF528Q3MIS6 628 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 ARID3BQ8IVW6 561 aaPredicted RBP29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 SUMF1Q8NBK3 374 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 STKLD1Q8NE28 680 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 CSGALNACT1Q8TDX6 532 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 ATRIPQ8WXE1 791 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 RUBCNQ92622 972 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 DNAJC19Q96DA6 116 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 USP28Q96RU2 1077 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 MKNK1Q9BUB5 465 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 ZCWPW1Q9H0M4 648 aa29.22■■■□□ 2.27
SNRPA1-215ENST00000561187 A0A087X0B3 334 aa29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 GOLGA8IPA6NC78 632 aa29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 GOLGA8JA6NMD2 632 aa29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 STAT6P42226 847 aa29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 ZNF687Q8N1G0 1237 aa29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 HVCN1Q96D96 273 aa29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 GPR88Q9GZN0 384 aa29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 SMG9Q9H0W8 520 aaKnown RBP29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 LMAN1LQ9HAT1 526 aa29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 PRMT8Q9NR22 394 aaPredicted RBP29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 DSEQ9UL01 958 aa29.21■■■□□ 2.27
SNRPA1-215ENST00000561187 ARNTLO00327 626 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 DPYSL4O14531 572 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 PRAMEF12O95522 483 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 POLR2BP30876 1174 aaKnown RBP29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 VEPH1Q14D04 833 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 L1TD1Q5T7N2 865 aaKnown RBP29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 ITIH5Q86UX2 942 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 LRRTM3Q86VH5 581 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 PDILTQ8N807 584 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 RMDN1Q96DB5 314 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 LRRC3BQ96PB8 259 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 ACCSQ96QU6 501 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 CHRDQ9H2X0 955 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 RBM12Q9NTZ6 932 aaKnown RBP29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 ZSCAN32Q9NX65 697 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 NCDNQ9UBB6 729 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 PCDHGA2Q9Y5H1 932 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 DNAH14Q0VDD8 3507 aa29.2■■■□□ 2.26
SNRPA1-215ENST00000561187 CEP250Q9BV73 2442 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 GAP43P17677 238 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 KPNA1P52294 538 aaPredicted RBP29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 TAF12Q16514 161 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 SV2CQ496J9 727 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 ARHGAP15Q53QZ3 475 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 SCARA3Q6AZY7 606 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 SYCP3Q8IZU3 236 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 THEM5Q8N1Q8 247 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 SEL1LQ9UBV2 794 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 EXOC7Q9UPT5 735 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 ASB3Q9Y575 518 aa29.19■■■□□ 2.26
SNRPA1-215ENST00000561187 IL18RAPO95256 599 aa29.18■■■□□ 2.26
SNRPA1-215ENST00000561187 ITGB3P05106 788 aa29.18■■■□□ 2.26
SNRPA1-215ENST00000561187 GPR15P49685 360 aa29.18■■■□□ 2.26
SNRPA1-215ENST00000561187 POSTNQ15063 836 aa29.18■■■□□ 2.26
SNRPA1-215ENST00000561187 ZNF560Q96MR9 790 aa29.18■■■□□ 2.26
SNRPA1-215ENST00000561187 GCNAQ96QF7 691 aa29.18■■■□□ 2.26
SNRPA1-215ENST00000561187 CBWD1Q9BRT8 395 aa29.18■■■□□ 2.26
SNRPA1-215ENST00000561187 STRA6Q9BX79 667 aa29.18■■■□□ 2.26
SNRPA1-215ENST00000561187 PCIF1Q9H4Z3 704 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms