RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 GLB1LQ6UWU2 654 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 ARMCX2Q7L311 632 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 EEPD1Q7L9B9 569 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 ADGRA1Q86SQ6 560 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 TLK2Q86UE8 772 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 LURAP1LQ8IV03 231 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 CCDC105Q8IYK2 499 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 UBALD2Q8IYN6 164 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 DTX3Q8N9I9 347 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 TSR2Q969E8 191 aaKnown RBP4.55□□□□□ -1.68
HERC1-211ENST00000560983 ZSWIM3Q96MP5 696 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 TMEM168Q9H0V1 697 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 MEGF9Q9H1U4 602 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 PDGFCQ9NRA1 345 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 FBXO28Q9NVF7 368 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 SAP30BPQ9UHR5 308 aaKnown RBP4.55□□□□□ -1.68
HERC1-211ENST00000560983 ADAM29Q9UKF5 820 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 Q9Y3F1 56 aa4.55□□□□□ -1.68
HERC1-211ENST00000560983 C5orf67F2Z3F1 127 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 ZEB2O60315 1214 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 ALDH1L1O75891 902 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 GLP2RO95838 553 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 CHGBP05060 677 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 PROS1P07225 676 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 ATF7P17544 494 aaPredicted RBP4.54□□□□□ -1.68
HERC1-211ENST00000560983 AOC1P19801 751 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 NDUFV1P49821 464 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 PPP2CBP62714 309 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 PPP2CAP67775 309 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 GSTO1P78417 241 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 PURAQ00577 322 aaKnown RBP4.54□□□□□ -1.68
HERC1-211ENST00000560983 BFSP2Q13515 415 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 TAPT1Q6NXT6 567 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 NOL8Q76FK4 1167 aaKnown RBP4.54□□□□□ -1.68
HERC1-211ENST00000560983 SPICE1Q8N0Z3 855 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 EFHBQ8N7U6 833 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 IGDCC4Q8TDY8 1250 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 AFAP1L1Q8TED9 768 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 KCTD13Q8WZ19 329 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 SGSM3Q96HU1 749 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 YIPF4Q9BSR8 244 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 RTKNQ9BST9 563 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 LMAN2LQ9H0V9 348 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 S1PR5Q9H228 398 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 L2HGDHQ9H9P8 463 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 AATFQ9NY61 560 aaKnown RBP eCLIP4.54□□□□□ -1.68
HERC1-211ENST00000560983 HMG20BQ9P0W2 317 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 PPARGC1AQ9UBK2 798 aaKnown RBP4.54□□□□□ -1.68
HERC1-211ENST00000560983 ST6GALNAC2Q9UJ37 374 aa4.54□□□□□ -1.68
HERC1-211ENST00000560983 DDX49Q9Y6V7 483 aaKnown RBP4.54□□□□□ -1.68
HERC1-211ENST00000560983 PRR5-ARHGAP8B1AHC4 643 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 PATE3B3GLJ2 98 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 MAFKO60675 156 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 EFCAB14O75071 495 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 KLHL18O94889 574 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 CYP1A1P04798 512 aaPredicted RBP4.53□□□□□ -1.68
HERC1-211ENST00000560983 RB1P06400 928 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 DNAJB1P25685 340 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 ERCC5P28715 1186 aaPredicted RBP4.53□□□□□ -1.68
HERC1-211ENST00000560983 BMPR1AP36894 532 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 PLCD1P51178 756 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 ARHGAP8P85298 464 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 SHC2P98077 582 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 CNTN2Q02246 1040 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 GABPAQ06546 454 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 DMWDQ09019 674 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 NFATC3Q12968 1075 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 IQSEC1Q6DN90 963 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 NFRKBQ6P4R8 1299 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 ATF7IPQ6VMQ6 1270 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 OTOP3Q7RTS5 596 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 ADGRD2Q7Z7M1 963 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 MCF2L2Q86YR7 1114 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 TRIM48Q8IWZ4 208 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 KBTBD2Q8IY47 623 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 Q8N1X5 172 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 CELF2-AS1Q8N7Q2 184 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 UHMK1Q8TAS1 419 aaKnown RBP4.53□□□□□ -1.68
HERC1-211ENST00000560983 CLEC4DQ8WXI8 215 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 TOP1MTQ969P6 601 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 WWC2-AS2Q96NR7 200 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 MTG1Q9BT17 334 aaPredicted RBP4.53□□□□□ -1.68
HERC1-211ENST00000560983 CABP5Q9NP86 173 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 DLL4Q9NR61 685 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 SERPINB13Q9UIV8 391 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 BARX2Q9UMQ3 279 aaPredicted RBP4.53□□□□□ -1.68
HERC1-211ENST00000560983 SORCS3Q9UPU3 1222 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 TMX2Q9Y320 296 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 OTOGLQ3ZCN5 2332 aa4.53□□□□□ -1.68
HERC1-211ENST00000560983 GCN1Q92616 2671 aaKnown RBP4.52□□□□□ -1.69
HERC1-211ENST00000560983 TAF4O00268 1085 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 KRIT1O00522 736 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 APAF1O14727 1248 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 KLF4O43474 513 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 CIAO1O76071 339 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 BAG3O95817 575 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 HLA-DOAP06340 250 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 CKBP12277 381 aa4.52□□□□□ -1.69
HERC1-211ENST00000560983 COPB2P35606 906 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms