RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CST3P01034 146 aaPredicted RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 ATF2P15336 505 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 PCSK1P29120 753 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 GTF2F1P35269 517 aaKnown RBP eCLIP15□□□□□ -0.01
PKNOX1-209ENST00000560448 ZNF165P49910 485 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 MXI1P50539 228 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 DLG4P78352 724 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 MYL7Q01449 175 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 ZNF699Q32M78 642 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 DPCR1Q3MIW9 517 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 CCDC40Q4G0X9 1142 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 ZNF667Q5HYK9 610 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 LIN9Q5TKA1 542 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 EP400NLQ6ZTU2 488 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 ASB2Q96Q27 587 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 ACBD6Q9BR61 282 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 AFF4Q9UHB7 1163 aaKnown RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 MTCL1Q9Y4B5 1905 aaKnown RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 TSC2P49815 1807 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 SPDYE4A6NLX3 237 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 GABRDO14764 452 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 LINC01565O15544 149 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 HNRNPA1P09651 372 aaKnown RBP eCLIP15□□□□□ -0.01
PKNOX1-209ENST00000560448 TRIM21P19474 475 aaKnown RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 IGFBP6P24592 240 aaPredicted RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 ELF1P32519 619 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 ROR1Q01973 937 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 GPR17Q13304 367 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 MAPRE1Q15691 268 aaKnown RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 TPD52L1Q16890 204 aaPredicted RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 WDR72Q3MJ13 1102 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 DCAF17Q5H9S7 520 aaPredicted RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 C1orf220Q5T0J3 134 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 TCERG1LQ5VWI1 586 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 LUZP1Q86V48 1076 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 PDCL2Q8N4E4 241 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 TTC39CQ8N584 583 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 KREMEN2Q8NCW0 462 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 FBXL13Q8NEE6 735 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 VN1R2Q8NFZ6 395 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 SLC35C1Q96A29 364 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 SRRTQ9BXP5 876 aaKnown RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 DNAI2Q9GZS0 605 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 XYLT2Q9H1B5 865 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 ADAM7Q9H2U9 754 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 THAP9Q9H5L6 903 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 MAN1C1Q9NR34 630 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 BARX2Q9UMQ3 279 aaPredicted RBP15□□□□□ -0.01
PKNOX1-209ENST00000560448 ZMYND10O75800 440 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 ASS1P00966 412 aaKnown RBP14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 CPB1P15086 417 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 EPCAMP16422 314 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 RPL17P18621 184 aaKnown RBP14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 PIK3CAP42336 1068 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 GCLMP48507 274 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 MYL6P60660 151 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 TSPY1Q01534 308 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 PPP3CAQ08209 521 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 NFE2Q16621 373 aaPredicted RBP14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 WSCD1Q658N2 575 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 SMYD5Q6GMV2 418 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 LLGL2Q6P1M3 1020 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 PALB2Q86YC2 1186 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 TRIM59Q8IWR1 403 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 TCEAL8Q8IYN2 117 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 DCP1BQ8IZD4 617 aaKnown RBP14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 ADGRF2Q8IZF7 708 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 ENOX1Q8TC92 643 aaKnown RBP14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 RIPOR3Q96MK2 946 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 NAT10Q9H0A0 1025 aaKnown RBP14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 PRKAG3Q9UGI9 489 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 L1RE1Q9UN81 338 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 COQ4Q9Y3A0 265 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 EYSQ5T1H1 3165 aa14.99□□□□□ -0.01
PKNOX1-209ENST00000560448 WDR27A2RRH5 827 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 VNN1O95497 513 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 TRIM49P0CI25 452 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 TRIM49CP0CI26 452 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 WARSP23381 471 aaKnown RBP14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 MTHFRP42898 656 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 STX17P56962 302 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 DLX2Q07687 328 aaPredicted RBP14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 SOWAHAQ2M3V2 549 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 TJAP1Q5JTD0 557 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 SYCE2Q6PIF2 218 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 EEF2KMTQ96G04 330 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 MMS19Q96T76 1030 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 BPIFA3Q9BQP9 254 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 ZCWPW1Q9H0M4 648 aa14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 TIMM13Q9Y5L4 95 aaPredicted RBP14.98□□□□□ -0.01
PKNOX1-209ENST00000560448 BRWD1Q9NSI6 2320 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 GRXCR2A6NFK2 248 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 H3BQ06 376 aaPredicted RBP14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 MBTPS2O43462 519 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 XYLBO75191 536 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 ADCY5O95622 1261 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 HLA-DRAP01903 254 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 NOP14P78316 857 aaKnown RBP14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 PLD1Q13393 1074 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms