RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 TNPO2O14787 897 aaKnown RBP14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 F2P00734 622 aa14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 IBSPP21815 317 aaPredicted RBP14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 MFSD10Q14728 455 aa14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 SURF1Q15526 300 aa14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 FAM187BQ17R55 369 aa14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 LIN9Q5TKA1 542 aa14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 SLC13A5Q86YT5 568 aaPredicted RBP14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 CXorf38Q8TB03 319 aa14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 C18orf25Q96B23 403 aaPredicted RBP14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 ACAP3Q96P50 834 aa14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 RASSF4Q9H2L5 321 aa14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 TTC7AQ9ULT0 858 aaPredicted RBP14.96□□□□□ -0.02
CARMIL3-203ENST00000560349 A0A1B0GUA9 196 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 IL18RAPO95256 599 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 MMP8P22894 467 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 OGDHQ02218 1023 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 KCTD16Q68DU8 428 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 IFNL1Q8IU54 200 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 CCDC26Q8TAB7 109 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 HPDLQ96IR7 371 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 ADPGKQ9BRR6 497 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 ELOVL4Q9GZR5 314 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 ADAMTS10Q9H324 1103 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 TUBGCP4Q9UGJ1 667 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 COL1A2P08123 1366 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 F8VP50 259 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 HCRTO43612 131 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 HOXD8P13378 290 aaPredicted RBP14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 TNFRSF8P28908 595 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 PSMC4P43686 418 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 ZNF252P-AS1Q0IIN9 211 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 TXNRD3NBQ6F5E7 133 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 CHADLQ6NUI6 762 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 RGMBQ6NW40 437 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 CCDC137Q6PK04 289 aaKnown RBP14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 MAATS1Q7Z4T9 603 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 JAMLQ86YT9 394 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 CAVIN3Q969G5 261 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 ARL8AQ96BM9 186 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 SLITRK6Q9H5Y7 841 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 AVENQ9NQS1 362 aaPredicted RBP14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 SLC5A4Q9NY91 659 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 GJD2Q9UKL4 321 aa14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 UTP11Q9Y3A2 253 aaKnown RBP14.95□□□□□ -0.02
CARMIL3-203ENST00000560349 GPR32O75388 356 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 RAD23BP54727 409 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 TRIP13Q15645 432 aaPredicted RBP14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 SKIDA1Q1XH10 827 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 PTPN20Q4JDL3 420 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 C17orf99Q6UX52 265 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 SESTD1Q86VW0 696 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 PHF13Q86YI8 300 aaPredicted RBP14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 CCDC105Q8IYK2 499 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 C12orf29Q8N999 325 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 WHAMMQ8TF30 809 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 RNF25Q96BH1 459 aaPredicted RBP14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 LPIN3Q9BQK8 851 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 CHST7Q9NS84 486 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 DPP3Q9NY33 737 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 PIN4Q9Y237 131 aaKnown RBP14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 R3HDM2Q9Y2K5 976 aaKnown RBP14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 ANKRD65E5RJM6 399 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 PROSCO94903 275 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 SIX1Q15475 284 aaPredicted RBP14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 DCUN1D2Q6PH85 259 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 IFNLR1Q8IU57 520 aaPredicted RBP14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 SH2D3CQ8N5H7 860 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 EMC1Q8N766 993 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 UBA3Q8TBC4 463 aa14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 NAP1L3Q99457 506 aaPredicted RBP14.94□□□□□ -0.02
CARMIL3-203ENST00000560349 PHF2O75151 1096 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 C6orf222P0C671 652 aaPredicted RBP14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 MYBL1P10243 752 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 RALAP11233 206 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 PLTPP55058 493 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 UBAP2Q5T6F2 1119 aaKnown RBP14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 KAZNQ674X7 775 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 PLEKHA7Q6IQ23 1121 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 DNAJC24Q6P3W2 148 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 TRIM72Q6ZMU5 477 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 PRUNE1Q86TP1 453 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 SLC4A11Q8NBS3 891 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 PIK3R5Q8WYR1 880 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 DDX27Q96GQ7 796 aaKnown RBP14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 CPXM1Q96SM3 734 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 GOLGA2P5Q9HBQ8 144 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 LRRC4CQ9HCJ2 640 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 ABT1Q9ULW3 272 aaKnown RBP14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 SCN1AP35498 2009 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 GOLGA6CA6NDK9 693 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 MANSC4A6NHS7 340 aaPredicted RBP14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 SHOX2O60902 331 aaPredicted RBP14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 PGK1P00558 417 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 GOLGA6DP0CG33 693 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 CTNNA2P26232 953 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 VPS41P49754 854 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 POU5F1BQ06416 359 aa14.93□□□□□ -0.02
CARMIL3-203ENST00000560349 ADCY2Q08462 1091 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms