RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 TMC8Q8IU68 726 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 ZNF507Q8TCN5 953 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 ASB16Q96NS5 453 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 ZFP14Q9HCL3 533 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 FAM13BQ9NYF5 915 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 RCOR1Q9UKL0 485 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 AGAP1Q9UPQ3 857 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 ASB3Q9Y575 518 aa22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 ZFHX2Q9C0A1 2572 aaPredicted RBP22.07■■□□□ 1.12
CHRNA3-207ENST00000559941 ITGB3P05106 788 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 POLR2BP30876 1174 aaKnown RBP22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 HOXD13P35453 343 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 SLC39A12Q504Y0 691 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 FAM26FQ5R3K3 315 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 EPM2AIP1Q7L775 607 aaPredicted RBP22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 TTC9BQ8N6N2 239 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 SHKBP1Q8TBC3 707 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 NOC3LQ8WTT2 800 aaKnown RBP22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 ZSWIM3Q96MP5 696 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 DDX23Q9BUQ8 820 aaKnown RBP22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 GPR88Q9GZN0 384 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 PDE11AQ9HCR9 933 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 DLGAP2Q9P1A6 1054 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 SIT1Q9Y3P8 196 aa22.06■■□□□ 1.12
CHRNA3-207ENST00000559941 PROB1E7EW31 1015 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 TULP1O00294 542 aaPredicted RBP22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 GJA1P17302 382 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 NBL1P41271 181 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 TUFMP49411 452 aaKnown RBP22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 DNM1Q05193 864 aaKnown RBP22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 EHHADHQ08426 723 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 SMARCB1Q12824 385 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 ANGPT1Q15389 498 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 TEAD2Q15562 447 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 UNC13DQ70J99 1090 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 LRRC52Q8N7C0 313 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 PJA1Q8NG27 643 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 CXorf38Q8TB03 319 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 C2orf15Q8WU43 125 aaKnown RBP22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 SMARCD2Q92925 531 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 PSMG2Q969U7 264 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 FOXQ1Q9C009 403 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 ITGA11Q9UKX5 1188 aa22.05■■□□□ 1.12
CHRNA3-207ENST00000559941 CACNA1IQ9P0X4 2223 aa22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 COL4A3Q01955 1670 aa22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 KANSL1LA0AUZ9 987 aa22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 ZNF233A6NK53 670 aa22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 DCNP07585 359 aaKnown RBP22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 DNAJB7Q7Z6W7 309 aaPredicted RBP22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 LRRTM3Q86VH5 581 aa22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 CSGALNACT2Q8N6G5 542 aa22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 TRPV4Q9HBA0 871 aa22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 USP34Q70CQ2 3546 aa22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 DENND4CQ5VZ89 1909 aa22.04■■□□□ 1.12
CHRNA3-207ENST00000559941 NUP210Q8TEM1 1887 aaPredicted RBP22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 SOAT2O75908 522 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 TMEM191BP0C7N4 346 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 CASP1P29466 404 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 RBP5P82980 135 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 SURF1Q15526 300 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 SCARA3Q6AZY7 606 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 ITIH5Q86UX2 942 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 DCP1BQ8IZD4 617 aaKnown RBP22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 ZSCAN18Q8TBC5 510 aaPredicted RBP22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 SPPL2BQ8TCT7 592 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 FAM84AQ96KN4 292 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 BLZF1Q9H2G9 400 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 KIAA1586Q9HCI6 787 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 INTS13Q9NVM9 706 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 GDAP2Q9NXN4 497 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 HSPBP1Q9NZL4 362 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 UBE4BO95155 1302 aa22.03■■□□□ 1.12
CHRNA3-207ENST00000559941 F5P12259 2224 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 PVALEFA0A1B0GWK0 134 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 A0A1W2PRU2 124 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 TGFB1I1O43294 461 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 VITQ6UXI7 678 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 CBWD2Q8IUF1 395 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 PDCL2Q8N4E4 241 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 DNASE1L2Q92874 299 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 ANKRD36BP1Q96IX9 119 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 SEPT5Q99719 369 aaPredicted RBP22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 TRMT61BQ9BVS5 477 aaKnown RBP22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 OSBPL6Q9BZF3 934 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 MTMR12Q9C0I1 747 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 ZNF334Q9HCZ1 680 aaPredicted RBP22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 SIX4Q9UIU6 781 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 L1RE1Q9UN81 338 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 MYO15AQ9UKN7 3530 aa22.02■■□□□ 1.12
CHRNA3-207ENST00000559941 TICRRQ7Z2Z1 1910 aa22.02■■□□□ 1.11
CHRNA3-207ENST00000559941 COL4A2P08572 1712 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 HUS1O60921 280 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 FGF19O95750 216 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 KRT19P08727 400 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 HAPLN1P10915 354 aaPredicted RBP22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 PSMC3P17980 439 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 VIPR2P41587 438 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 AFMP43652 599 aa22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 SNRPFP62306 86 aaKnown RBP22.01■■□□□ 1.11
CHRNA3-207ENST00000559941 BFSP1Q12934 665 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms