RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 LRRC71Q8N4P6 559 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 LINC01465Q8N7H1 131 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 SMC1BQ8NDV3 1235 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 FNIP1Q8TF40 1166 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 ZNF473Q8WTR7 871 aaKnown RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 C1orf54Q8WWF1 131 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 EMID1Q96A84 441 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 ELMO3Q96BJ8 720 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 OPTNQ96CV9 577 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 CLMNQ96JQ2 1002 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 FAM84AQ96KN4 292 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 SCLT1Q96NL6 688 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 TRAIPQ9BWF2 469 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 FRMD8P1Q9BZ68 369 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 XYLT2Q9H1B5 865 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 CDT1Q9H211 546 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 RPF1Q9H9Y2 349 aaKnown RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 CYP3A43Q9HB55 503 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 TXNRD2Q9NNW7 524 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 CHST7Q9NS84 486 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 ASIC3Q9UHC3 531 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 DRG1Q9Y295 367 aaKnown RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 EFR3BQ9Y2G0 817 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 NEU2Q9Y3R4 380 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 A0A087WUV0 522 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 FAM170AA1A519 330 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 GMNCA6NCL1 334 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 TTLL13PA6NNM8 815 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 INO80B-WBP1J3KQ70 363 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 RASGRF2O14827 1237 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 PEX10O60683 326 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 CAND2O75155 1236 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 TJP3O95049 919 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 STAU1O95793 577 aaKnown RBP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 CPP00450 1065 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 PGK2P07205 417 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 WEE2P0C1S8 567 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 RALAP11233 206 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 P4HA1P13674 534 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 BRD2P25440 801 aaKnown RBP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 MARK3P27448 753 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 MAGEA9P43362 315 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 ASPAP45381 313 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 TFAMQ00059 246 aaKnown RBP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 ARHGAP1Q07960 439 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 NFX1Q12986 1120 aaKnown RBP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 ZNF268Q14587 947 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 ACAP1Q15027 740 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 Q3C1V9 767 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 ZNF792Q3KQV3 632 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 SEZ6Q53EL9 994 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 ZNF667Q5HYK9 610 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 EEF1DP3Q658K8 133 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 ZNF365Q70YC5 407 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 TAOK1Q7L7X3 1001 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 EEPD1Q7L9B9 569 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 ERICH1Q86X53 443 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 TRIM50Q86XT4 487 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 PASD1Q8IV76 773 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 CCDC50Q8IVM0 306 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 FBXO16Q8IX29 292 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 IPO4Q8TEX9 1081 aaKnown RBP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 SERPINB12Q96P63 405 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 SLITRK1Q96PX8 696 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 CCT8L2Q96SF2 557 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 HERPUD2Q9BSE4 406 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 INO80BQ9C086 356 aaPredicted RBP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 PHACTR1Q9C0D0 580 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 SEMA4AQ9H3S1 761 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 CCDC134Q9H6E4 229 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 BCCIPQ9P287 314 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMAD3-212ENST00000559937 ANAPC5Q9UJX4 755 aa8.56□□□□□ -1.04
SMAD3-212ENST00000559937 hCG_1818297A0A087WSY0 165 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 SIGLEC16A6NMB1 481 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 E7EVH7 732 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 TP73O15350 636 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 STRNO43815 780 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 KIAA0754O94854 1291 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 TTC4O95801 387 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 KRT1P04264 644 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 SHBGP04278 402 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 LGALS2P05162 132 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 KRT7P08729 469 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 ABHD2P08910 425 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 KLRC2P26717 231 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 TMOD1P28289 359 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 LACTBP83111 547 aaPredicted RBP8.55□□□□□ -1.04
SMAD3-212ENST00000559937 IRF5Q13568 498 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 SNX1Q13596 522 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
SMAD3-212ENST00000559937 AMHR2Q16671 573 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 TMEM132AQ24JP5 1023 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 EAPPQ56P03 285 aaPredicted RBP8.55□□□□□ -1.04
SMAD3-212ENST00000559937 TFDP3Q5H9I0 405 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 ERMARDQ5T6L9 678 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 TAPT1Q6NXT6 567 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 LLGL2Q6P1M3 1020 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 DCUN1D2Q6PH85 259 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 SPOCD1Q6ZMY3 1216 aa8.55□□□□□ -1.04
SMAD3-212ENST00000559937 ARMCX2Q7L311 632 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms