RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 ELOVL4Q9GZR5 314 aa13□□□□□ -0.33
HERC1-205ENST00000559886 NRDE2Q9H7Z3 1164 aa13□□□□□ -0.33
HERC1-205ENST00000559886 TRMT1Q9NXH9 659 aaKnown RBP13□□□□□ -0.33
HERC1-205ENST00000559886 HMGXB4Q9UGU5 601 aa13□□□□□ -0.33
HERC1-205ENST00000559886 NAGPAQ9UK23 515 aa13□□□□□ -0.33
HERC1-205ENST00000559886 TSC2P49815 1807 aa13□□□□□ -0.33
HERC1-205ENST00000559886 USP27XA6NNY8 438 aa13□□□□□ -0.33
HERC1-205ENST00000559886 TBKBP1A7MCY6 615 aa13□□□□□ -0.33
HERC1-205ENST00000559886 TMEM189-UBE2V1I3L0A0 370 aa13□□□□□ -0.33
HERC1-205ENST00000559886 CCP110O43303 1012 aa13□□□□□ -0.33
HERC1-205ENST00000559886 MMEP08473 750 aa13□□□□□ -0.33
HERC1-205ENST00000559886 NDST1P52848 882 aa13□□□□□ -0.33
HERC1-205ENST00000559886 DEFB103AP81534 67 aa13□□□□□ -0.33
HERC1-205ENST00000559886 FMO1Q01740 532 aa13□□□□□ -0.33
HERC1-205ENST00000559886 TIGD5Q53EQ6 642 aa13□□□□□ -0.33
HERC1-205ENST00000559886 TAF3Q5VWG9 929 aa13□□□□□ -0.33
HERC1-205ENST00000559886 REXO1L1PQ8IX06 675 aa13□□□□□ -0.33
HERC1-205ENST00000559886 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
HERC1-205ENST00000559886 TMEM176AQ96HP8 235 aa13□□□□□ -0.33
HERC1-205ENST00000559886 DNAJB4Q9UDY4 337 aa13□□□□□ -0.33
HERC1-205ENST00000559886 ALKBH5Q6P6C2 394 aaKnown RBP12.99□□□□□ -0.33
HERC1-205ENST00000559886 OTOP2Q7RTS6 562 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 UNC93AQ86WB7 457 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 ZNF606Q8WXB4 792 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 PPP1R13BQ96KQ4 1090 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 NT5C1AQ9BXI3 368 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 PCDHA13Q9Y5I0 950 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 M0QZQ0 153 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 THAP12O43422 761 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 ZNF500O60304 480 aaPredicted RBP12.99□□□□□ -0.33
HERC1-205ENST00000559886 KIF4AO95239 1232 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 FGBP02675 491 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 WARSP23381 471 aaKnown RBP12.99□□□□□ -0.33
HERC1-205ENST00000559886 OR1G1P47890 313 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 C10orf76Q5T2E6 689 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 DSTYKQ6XUX3 929 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 ZNF365Q70YC5 407 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 PALB2Q86YC2 1186 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 ADGRF2Q8IZF7 708 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 TMEM86AQ8N2M4 240 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 LRRC43Q8N309 656 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 PCDHB18PQ96TA0 734 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 ZSWIM1Q9BR11 485 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 NME7Q9Y5B8 376 aa12.99□□□□□ -0.33
HERC1-205ENST00000559886 F8W810 466 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 GABRDO14764 452 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 ITGB1P05556 798 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 GNL1P36915 607 aaPredicted RBP12.98□□□□□ -0.33
HERC1-205ENST00000559886 MAGEA1P43355 309 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 VAV2P52735 878 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 PAN2Q504Q3 1202 aaKnown RBP12.98□□□□□ -0.33
HERC1-205ENST00000559886 CCDC122Q5T0U0 273 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 WSCD1Q658N2 575 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 OR6B3Q8NGW1 331 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 TFAP2BQ92481 460 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 ZNF689Q96CS4 500 aaPredicted RBP12.98□□□□□ -0.33
HERC1-205ENST00000559886 SUSD3Q96L08 255 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 SEPT11Q9NVA2 429 aaKnown RBP12.98□□□□□ -0.33
HERC1-205ENST00000559886 PUF60Q9UHX1 559 aaKnown RBP12.98□□□□□ -0.33
HERC1-205ENST00000559886 KIAA1257Q9ULG3 409 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 A0A0U1RQJ8 604 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 ALDH2P05091 517 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 GZMAP12544 262 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 SYN1P17600 705 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 BRD2P25440 801 aaKnown RBP12.98□□□□□ -0.33
HERC1-205ENST00000559886 BRCC3P46736 316 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 EPHB4P54760 987 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 ORC1Q13415 861 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 TMEM240Q5SV17 173 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 ZNF662Q6ZS27 426 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 KIAA1328Q86T90 577 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 HASPINQ8TF76 798 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 ATRIPQ8WXE1 791 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 TMEM175Q9BSA9 504 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 SNX25Q9H3E2 840 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 RC3H2Q9HBD1 1191 aaKnown RBP12.98□□□□□ -0.33
HERC1-205ENST00000559886 LUC7LQ9NQ29 371 aaKnown RBP12.98□□□□□ -0.33
HERC1-205ENST00000559886 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 STXBP5LQ9Y2K9 1186 aa12.98□□□□□ -0.33
HERC1-205ENST00000559886 GOLGA6L9A6NEM1 432 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 A8MXQ7 604 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 NRP1O14786 923 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 CYP11A1P05108 521 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 ODC1P11926 461 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 CD19P15391 556 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 PSRC1Q6PGN9 363 aaPredicted RBP12.97□□□□□ -0.33
HERC1-205ENST00000559886 OSTM1Q86WC4 334 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 SPATA18Q8TC71 538 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 HEXIM2Q96MH2 286 aaKnown RBP12.97□□□□□ -0.33
HERC1-205ENST00000559886 PCDHGC3Q9UN70 934 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 PRG3Q9Y2Y8 225 aaPredicted RBP12.97□□□□□ -0.33
HERC1-205ENST00000559886 ATP8B3O60423 1300 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 RCCD1A6NED2 376 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 CCDC85CA6NKD9 419 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 I3L4J1 428 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 CFHP08603 1231 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 VDRP11473 427 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 LMO2P25791 158 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms