RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 GABRR2P28476 465 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 CDC25CP30307 473 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 HOXA6P31267 233 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 GUCY2FP51841 1108 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 ZNF131P52739 623 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 POU5F1Q01860 360 aaKnown RBP9.93□□□□□ -0.82
HDDC3-204ENST00000559834 DHX8Q14562 1220 aaKnown RBP9.93□□□□□ -0.82
HDDC3-204ENST00000559834 TMEM132DQ14C87 1099 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 RABEP1Q15276 862 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 LPAL2Q16609 132 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 MGAT5BQ3V5L5 792 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 C9orf57Q5W0N0 161 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 JADE1Q6IE81 842 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 GPIHBP1Q8IV16 184 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 RASSF8Q8NHQ8 419 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 NETO1Q8TDF5 533 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 BPIFB1Q8TDL5 484 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 KIF2CQ99661 725 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 SEPT5Q99719 369 aaPredicted RBP9.93□□□□□ -0.82
HDDC3-204ENST00000559834 REEP2Q9BRK0 252 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 CRISPLD1Q9H336 500 aa9.93□□□□□ -0.82
HDDC3-204ENST00000559834 CEP250Q9BV73 2442 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 PATJQ8NI35 1801 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 ANO9A1A5B4 782 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 DCDC2BA2VCK2 349 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 CHURC1-FNTBB4DL54 471 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 CYB561D2O14569 222 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 HRO43593 1189 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 FAM189A1O60320 539 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 ATG13O75143 517 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 CTHP32929 405 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 DDIT3P35638 169 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 FNTBP49356 437 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 TAF6P49848 677 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 GTF2BQ00403 316 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 AMPD2Q01433 879 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 GAS6Q14393 721 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 POSTNQ15063 836 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 CSRP2Q16527 193 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 ITPRIPL2Q3MIP1 535 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 SLC39A12Q504Y0 691 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 STXBP5Q5T5C0 1151 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 ADALQ6DHV7 355 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 CEP68Q76N32 757 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.92□□□□□ -0.82
HDDC3-204ENST00000559834 DCP1BQ8IZD4 617 aaKnown RBP9.92□□□□□ -0.82
HDDC3-204ENST00000559834 KRI1Q8N9T8 703 aaKnown RBP9.92□□□□□ -0.82
HDDC3-204ENST00000559834 SPPL2BQ8TCT7 592 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 RSPRY1Q96DX4 576 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 PYM1Q9BRP8 204 aaKnown RBP9.92□□□□□ -0.82
HDDC3-204ENST00000559834 ZCWPW1Q9H0M4 648 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 PARD6AQ9NPB6 346 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 SEMA4GQ9NTN9 838 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 RBM12Q9NTZ6 932 aaKnown RBP9.92□□□□□ -0.82
HDDC3-204ENST00000559834 DPP3Q9NY33 737 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 GTSE1Q9NYZ3 720 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 C2CD2Q9Y426 696 aa9.92□□□□□ -0.82
HDDC3-204ENST00000559834 CACNA1AO00555 2505 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.91□□□□□ -0.82
HDDC3-204ENST00000559834 SOBPA7XYQ1 873 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 K7ESF4 209 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 PPEF2O14830 753 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 SLC30A4O14863 429 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 SOAT2O75908 522 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 NFICP08651 508 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 GJB2P29033 226 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 LONP1P36776 959 aaKnown RBP9.91□□□□□ -0.82
HDDC3-204ENST00000559834 AVPR1AP37288 418 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 SOX9P48436 509 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 MCM2P49736 904 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 ACOT2P49753 483 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 GRSF1Q12849 480 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDDC3-204ENST00000559834 MCM6Q14566 821 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 PON2Q15165 354 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 LARP1BQ659C4 914 aaKnown RBP9.91□□□□□ -0.82
HDDC3-204ENST00000559834 HEATR6Q6AI08 1181 aaKnown RBP9.91□□□□□ -0.82
HDDC3-204ENST00000559834 NT5DC4Q86YG4 428 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 TMEM130Q8N3G9 435 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 TTC9BQ8N6N2 239 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 OR10T2Q8NGX3 314 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 TTC8Q8TAM2 541 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 DDX1Q92499 740 aaKnown RBP9.91□□□□□ -0.82
HDDC3-204ENST00000559834 RAD54LQ92698 747 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 EXOC4Q96A65 974 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 TMX3Q96JJ7 454 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 ZFYVE19Q96K21 471 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 LRRC3BQ96PB8 259 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 TMEM209Q96SK2 561 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 MKNK1Q9BUB5 465 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 SLC46A2Q9BY10 475 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 ST6GALNAC4Q9H4F1 302 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 GKN1Q9NS71 199 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 AGO2Q9UKV8 859 aaKnown RBP9.91□□□□□ -0.82
HDDC3-204ENST00000559834 STYXL1Q9Y6J8 313 aa9.91□□□□□ -0.82
HDDC3-204ENST00000559834 MYH11P35749 1972 aa9.9□□□□□ -0.82
HDDC3-204ENST00000559834 NCANO14594 1321 aa9.9□□□□□ -0.82
HDDC3-204ENST00000559834 ZNF292O60281 2723 aa9.9□□□□□ -0.82
HDDC3-204ENST00000559834 CCDC163A0A0D9SF12 145 aa9.9□□□□□ -0.82
HDDC3-204ENST00000559834 KPNA7A9QM74 516 aa9.9□□□□□ -0.82
HDDC3-204ENST00000559834 IL18RAPO95256 599 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms