RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 WRAP73Q9P2S5 460 aaPredicted RBP10.6□□□□□ -0.71
SMAD3-211ENST00000559460 PILRBQ9UKJ0 227 aa10.6□□□□□ -0.71
SMAD3-211ENST00000559460 ASCC3Q8N3C0 2202 aaKnown RBP10.6□□□□□ -0.71
SMAD3-211ENST00000559460 NUP210Q8TEM1 1887 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-211ENST00000559460 CYP3A7-CYP3A51PA0A087WV96 503 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 SLC27A2O14975 620 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 RRP8O43159 456 aaKnown RBP10.59□□□□□ -0.71
SMAD3-211ENST00000559460 USO1O60763 962 aaKnown RBP10.59□□□□□ -0.71
SMAD3-211ENST00000559460 ARSAP15289 507 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 CYP3A7P24462 503 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 IGFBP6P24592 240 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-211ENST00000559460 CDC27P30260 824 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 GJA4P35212 333 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 ARL2P36404 184 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 RCAN1P53805 252 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 NUCB1Q02818 461 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 RPL6Q02878 288 aaKnown RBP10.59□□□□□ -0.71
SMAD3-211ENST00000559460 DUSP4Q13115 394 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 MRPL58Q14197 206 aaKnown RBP10.59□□□□□ -0.71
SMAD3-211ENST00000559460 FAM187BQ17R55 369 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 C2orf27AQ580R0 203 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 DNAJB7Q7Z6W7 309 aaPredicted RBP10.59□□□□□ -0.71
SMAD3-211ENST00000559460 USP37Q86T82 979 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 SMC5Q8IY18 1101 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 CMTM8Q8IZV2 173 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 OR2I1PQ8NGU4 316 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 SETD7Q8WTS6 366 aaKnown RBP10.59□□□□□ -0.71
SMAD3-211ENST00000559460 DDX12PQ92771 950 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 PNMA5Q96PV4 448 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 DNAJC25Q9H1X3 360 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 CXCL16Q9H2A7 254 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 FBRSL1Q9HCM7 1045 aaKnown RBP10.59□□□□□ -0.71
SMAD3-211ENST00000559460 RGL1Q9NZL6 768 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 VPS54Q9P1Q0 977 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 MMP17Q9ULZ9 603 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 LAMA1P25391 3075 aa10.59□□□□□ -0.71
SMAD3-211ENST00000559460 FREM2Q5SZK8 3169 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 KIF26AQ9ULI4 1882 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-211ENST00000559460 SMIM28A0A1B0GU29 152 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 TEX51A0A1B0GUA7 166 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 TRABD2BA6NFA1 517 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 PRPF3O43395 683 aaKnown RBP10.58□□□□□ -0.72
SMAD3-211ENST00000559460 NTRK1P04629 796 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 RPL9P32969 192 aaKnown RBP10.58□□□□□ -0.72
SMAD3-211ENST00000559460 ADD1P35611 737 aaKnown RBP10.58□□□□□ -0.72
SMAD3-211ENST00000559460 IFNAR2P48551 515 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 CRY1Q16526 586 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 TAF1BQ53T94 588 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-211ENST00000559460 RNF20Q5VTR2 975 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 PEAR1Q5VY43 1037 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-211ENST00000559460 CD300LGQ6UXG3 332 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 SLC36A4Q6YBV0 504 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 MAEAQ7L5Y9 396 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 TMPRSS7Q7RTY8 843 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 CCDC33Q8N5R6 958 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 PDCD7Q8N8D1 485 aaKnown RBP10.58□□□□□ -0.72
SMAD3-211ENST00000559460 DEPTORQ8TB45 409 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 ATP2A3Q93084 1043 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 SUSD3Q96L08 255 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 FNBP1Q96RU3 617 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 TDP1Q9NUW8 608 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 VAV3Q9UKW4 847 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 BRPF3Q9ULD4 1205 aa10.58□□□□□ -0.72
SMAD3-211ENST00000559460 OTOL1A6NHN0 477 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-211ENST00000559460 OR6C75A6NL08 312 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 ACKR2O00590 384 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 ZBTB39O15060 712 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 BAG4O95429 457 aaKnown RBP10.57□□□□□ -0.72
SMAD3-211ENST00000559460 OR4Q2P0C623 313 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 GNSP15586 552 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 NBR1Q14596 966 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 PLEKHG6Q3KR16 790 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 TTC22Q5TAA0 569 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 CDCA2Q69YH5 1023 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-211ENST00000559460 ARMCX5Q6P1M9 558 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 GPR155Q7Z3F1 870 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 RGL4Q8IZJ4 473 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 DAGLBQ8NCG7 672 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 OLIG1Q8TAK6 271 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 USP33Q8TEY7 942 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 HMGB4Q8WW32 186 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 BAP1Q92560 729 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 DRC1Q96MC2 740 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 SEPT5Q99719 369 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-211ENST00000559460 FZD8Q9H461 694 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 ECT2Q9H8V3 914 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 CAPN10Q9HC96 672 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 ANKEF1Q9NU02 776 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 DUS2Q9NX74 493 aaKnown RBP10.57□□□□□ -0.72
SMAD3-211ENST00000559460 KIAA1522Q9P206 1035 aaPredicted RBP10.57□□□□□ -0.72
SMAD3-211ENST00000559460 SUSD2Q9UGT4 822 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 TBX20Q9UMR3 447 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 PCDHB8Q9UN66 801 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 SLC27A5Q9Y2P5 690 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 PCNX2A6NKB5 2137 aa10.57□□□□□ -0.72
SMAD3-211ENST00000559460 ARID2Q68CP9 1835 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 GOLGA8CPA6NN73 597 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 ZBTB24O43167 697 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 SLC37A4O43826 429 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 EDIL3O43854 480 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms