RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 NCANO14594 1321 aa16.14■□□□□ 0.17
LRRC28-213ENST00000559399 IDEP14735 1019 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 PNPLA4P41247 253 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 SMARCB1Q12824 385 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 FZD5Q13467 585 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 ALCAMQ13740 583 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 MGAT5BQ3V5L5 792 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 SV2CQ496J9 727 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 STXBP5Q5T5C0 1151 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 FAM200AQ8TCP9 573 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 C2orf15Q8WU43 125 aaKnown RBP16.13■□□□□ 0.17
LRRC28-213ENST00000559399 FAM3CQ92520 227 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 RSPRY1Q96DX4 576 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 BORCS6Q96GS4 357 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 ZNF560Q96MR9 790 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 FAM213AQ9BRX8 229 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 PRMT8Q9NR22 394 aaPredicted RBP16.13■□□□□ 0.17
LRRC28-213ENST00000559399 MTMR6Q9Y217 621 aa16.13■□□□□ 0.17
LRRC28-213ENST00000559399 KPNA7A9QM74 516 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 TULP1O00294 542 aaPredicted RBP16.12■□□□□ 0.17
LRRC28-213ENST00000559399 ARNTLO00327 626 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 ATF6P18850 670 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 GABRR2P28476 465 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 CASP5P51878 434 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 TFAMQ00059 246 aaKnown RBP16.12■□□□□ 0.17
LRRC28-213ENST00000559399 FCHO2Q0JRZ9 810 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 MTAPQ13126 283 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 SLC39A14Q15043 492 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 ARHGAP15Q53QZ3 475 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 WSCD1Q658N2 575 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 GAREM2Q75VX8 874 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 ARID3BQ8IVW6 561 aaPredicted RBP16.12■□□□□ 0.17
LRRC28-213ENST00000559399 BRSK2Q8IWQ3 736 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 SYCP3Q8IZU3 236 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 ZNF687Q8N1G0 1237 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 CSGALNACT1Q8TDX6 532 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 ATRIPQ8WXE1 791 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 RUBCNQ92622 972 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 MSANTD3Q96H12 275 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 LPIN3Q9BQK8 851 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 IER2Q9BTL4 223 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 MKNK1Q9BUB5 465 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 CHRDQ9H2X0 955 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 ZSCAN16Q9H4T2 348 aaPredicted RBP16.12■□□□□ 0.17
LRRC28-213ENST00000559399 ZSCAN32Q9NX65 697 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 RBAKQ9NYW8 714 aaPredicted RBP16.12■□□□□ 0.17
LRRC28-213ENST00000559399 PCDHB13Q9Y5F0 798 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 NOTCH4Q99466 2003 aa16.12■□□□□ 0.17
LRRC28-213ENST00000559399 FRMD3A2A2Y4 597 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 CHADO15335 359 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 ID4P47928 161 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 MLLT6P55198 1093 aaPredicted RBP16.11■□□□□ 0.17
LRRC28-213ENST00000559399 WNT7BP56706 349 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 FOXK2Q01167 660 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 TAF12Q16514 161 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 GPR158Q5T848 1215 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 C1orf228Q6PIY5 440 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 ZBTB44Q8NCP5 570 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 SPPL2BQ8TCT7 592 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 SAAL1Q96ER3 474 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 GCNAQ96QF7 691 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 PANK4Q9NVE7 773 aa16.11■□□□□ 0.17
LRRC28-213ENST00000559399 ABI2Q9NYB9 513 aaPredicted RBP16.11■□□□□ 0.17
LRRC28-213ENST00000559399 MYH15Q9Y2K3 1946 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 A0A087X0B3 334 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 DPYSL4O14531 572 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 STX6O43752 255 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 LDHAP00338 332 aaKnown RBP16.1■□□□□ 0.17
LRRC28-213ENST00000559399 GARTP22102 1010 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 CCNE1P24864 410 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 CDC25CP30307 473 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 POLR2BP30876 1174 aaKnown RBP16.1■□□□□ 0.17
LRRC28-213ENST00000559399 NASPP49321 788 aaPredicted RBP16.1■□□□□ 0.17
LRRC28-213ENST00000559399 CDR1P51861 262 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 TSPY1Q01534 308 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 PPP2R5DQ14738 602 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 TSSK4Q6SA08 328 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 KIAA2013Q8IYS2 634 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 DCP1BQ8IZD4 617 aaKnown RBP16.1■□□□□ 0.17
LRRC28-213ENST00000559399 SUMF1Q8NBK3 374 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 NELL1Q92832 810 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 CBWD1Q9BRT8 395 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 FAM126AQ9BYI3 521 aaPredicted RBP16.1■□□□□ 0.17
LRRC28-213ENST00000559399 FGFBP2Q9BYJ0 223 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 PANK2Q9BZ23 570 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 TMEM206Q9H813 350 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 OBP2AQ9NY56 170 aa16.1■□□□□ 0.17
LRRC28-213ENST00000559399 K7ELQ4 463 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-213ENST00000559399 EXTL3O43909 919 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 ITGB3P05106 788 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 HAPLN1P10915 354 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-213ENST00000559399 KPNA1P52294 538 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-213ENST00000559399 CYP4F8P98187 520 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 STK38Q15208 465 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 ARHGAP29Q52LW3 1261 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 MAMSTRQ6ZN01 415 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 LRRTM3Q86VH5 581 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 GPIHBP1Q8IV16 184 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms