RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 TXNP10599 105 aaKnown RBP13.25□□□□□ -0.29
CASC4-208ENST00000559151 CKBP12277 381 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 FDXRP22570 491 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 ICA1Q05084 483 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 PUM3Q15397 648 aaKnown RBP13.25□□□□□ -0.29
CASC4-208ENST00000559151 PDCD2Q16342 344 aaPredicted RBP13.25□□□□□ -0.29
CASC4-208ENST00000559151 TMEM95Q3KNT9 176 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 AMOTQ4VCS5 1084 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 GGT6Q6P531 493 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 ZNF527Q8NB42 609 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 NUP133Q8WUM0 1156 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 ATXN2LQ8WWM7 1075 aaKnown RBP13.25□□□□□ -0.29
CASC4-208ENST00000559151 STK33Q9BYT3 514 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 ZNF212Q9UDV6 495 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 TBC1D30Q9Y2I9 924 aa13.25□□□□□ -0.29
CASC4-208ENST00000559151 VPS4BO75351 444 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 RASSF9O75901 435 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 TCF15Q12870 199 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 TBC1D10BQ4KMP7 808 aaPredicted RBP13.24□□□□□ -0.29
CASC4-208ENST00000559151 C1QL3Q5VWW1 255 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 ZDHHC24Q6UX98 284 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 PPM1EQ8WY54 764 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 SPSB4Q96A44 273 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 LRRC46Q96FV0 321 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 LUZP4Q9P127 313 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 MID2Q9UJV3 735 aa13.24□□□□□ -0.29
CASC4-208ENST00000559151 GCSHP23434 173 aa13.23□□□□□ -0.29
CASC4-208ENST00000559151 ALDH9A1P49189 494 aa13.23□□□□□ -0.29
CASC4-208ENST00000559151 CCDC38Q502W7 563 aa13.23□□□□□ -0.29
CASC4-208ENST00000559151 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
CASC4-208ENST00000559151 DCAF17Q5H9S7 520 aaPredicted RBP13.23□□□□□ -0.29
CASC4-208ENST00000559151 PGBD2Q6P3X8 592 aa13.23□□□□□ -0.29
CASC4-208ENST00000559151 CATSPERGQ6ZRH7 1159 aa13.23□□□□□ -0.29
CASC4-208ENST00000559151 MARS2Q96GW9 593 aaKnown RBP13.23□□□□□ -0.29
CASC4-208ENST00000559151 NEU1Q99519 415 aa13.23□□□□□ -0.29
CASC4-208ENST00000559151 HESX1Q9UBX0 185 aa13.23□□□□□ -0.29
CASC4-208ENST00000559151 HDAC9Q9UKV0 1011 aa13.23□□□□□ -0.29
CASC4-208ENST00000559151 CLCA1A8K7I4 914 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 FFAR2O15552 330 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 BMP7P18075 431 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 BLMHQ13867 455 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 BOP1Q14137 746 aaKnown RBP13.22□□□□□ -0.29
CASC4-208ENST00000559151 METRNLQ641Q3 311 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 CFAP52Q8N1V2 620 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 MYCT1Q8N699 235 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 MIEF2Q96C03 454 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 ETAA1Q9NY74 926 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 SLC39A10Q9ULF5 831 aa13.22□□□□□ -0.29
CASC4-208ENST00000559151 hCG_1642624A0A1W2PR95 340 aa13.21□□□□□ -0.29
CASC4-208ENST00000559151 LEFTY2O00292 366 aa13.21□□□□□ -0.29
CASC4-208ENST00000559151 GPR42O15529 346 aa13.21□□□□□ -0.29
CASC4-208ENST00000559151 PDIA3P30101 505 aaKnown RBP13.21□□□□□ -0.29
CASC4-208ENST00000559151 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
CASC4-208ENST00000559151 POLNQ7Z5Q5 900 aa13.21□□□□□ -0.29
CASC4-208ENST00000559151 SDR16C5Q8N3Y7 309 aa13.21□□□□□ -0.29
CASC4-208ENST00000559151 NSUN7Q8NE18 718 aaKnown RBP13.21□□□□□ -0.29
CASC4-208ENST00000559151 CCT6BQ92526 530 aa13.21□□□□□ -0.29
CASC4-208ENST00000559151 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.21□□□□□ -0.29
CASC4-208ENST00000559151 VSX1Q9NZR4 365 aaPredicted RBP13.21□□□□□ -0.29
CASC4-208ENST00000559151 MYL4P12829 197 aa13.2□□□□□ -0.3
CASC4-208ENST00000559151 RABGGTBP53611 331 aa13.2□□□□□ -0.3
CASC4-208ENST00000559151 MUL1Q969V5 352 aa13.2□□□□□ -0.3
CASC4-208ENST00000559151 SMOQ99835 787 aa13.2□□□□□ -0.3
CASC4-208ENST00000559151 TTYH3Q9C0H2 523 aa13.2□□□□□ -0.3
CASC4-208ENST00000559151 AS3MTQ9HBK9 375 aa13.2□□□□□ -0.3
CASC4-208ENST00000559151 PCDHGB3Q9Y5G1 929 aa13.2□□□□□ -0.3
CASC4-208ENST00000559151 CAPN14A8MX76 684 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
CASC4-208ENST00000559151 AREL1O15033 823 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 NDST3O95803 873 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 PLATP00750 562 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 CHRM3P20309 590 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 IL1R2P27930 398 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 GRK6P43250 576 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 NHLH2Q02577 135 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 GRM1Q13255 1194 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 TLDC1Q6P9B6 456 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 LIMS2Q7Z4I7 341 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 YAF2Q8IY57 180 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 ANKRD35Q8N283 1001 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 VGLL2Q8N8G2 317 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 IPCEF1Q8WWN9 437 aaPredicted RBP13.19□□□□□ -0.3
CASC4-208ENST00000559151 SCLT1Q96NL6 688 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 SLC46A1Q96NT5 459 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 KCNC2Q96PR1 638 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 GDF15Q99988 308 aa13.19□□□□□ -0.3
CASC4-208ENST00000559151 CCDC78A2IDD5 438 aa13.18□□□□□ -0.3
CASC4-208ENST00000559151 FAM234BA2RU67 622 aa13.18□□□□□ -0.3
CASC4-208ENST00000559151 CSTBP04080 98 aaKnown RBP13.18□□□□□ -0.3
CASC4-208ENST00000559151 PAX3P23760 479 aa13.18□□□□□ -0.3
CASC4-208ENST00000559151 VIPR2P41587 438 aa13.18□□□□□ -0.3
CASC4-208ENST00000559151 PPM1FP49593 454 aaPredicted RBP13.18□□□□□ -0.3
CASC4-208ENST00000559151 TOB1P50616 345 aaPredicted RBP13.18□□□□□ -0.3
CASC4-208ENST00000559151 WNT3P56703 355 aa13.18□□□□□ -0.3
CASC4-208ENST00000559151 FAM102AQ5T9C2 384 aaPredicted RBP13.18□□□□□ -0.3
CASC4-208ENST00000559151 TAPT1Q6NXT6 567 aa13.18□□□□□ -0.3
CASC4-208ENST00000559151 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
CASC4-208ENST00000559151 SGMS1Q86VZ5 419 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms