RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 ASPAP45381 313 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 DSG1Q02413 1049 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 ADGRE1Q14246 886 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 SYCP1Q15431 976 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 PTPROQ16827 1216 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 CCDC142Q17RM4 750 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 FILIP1LQ4L180 1135 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 ZNF394Q53GI3 561 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 KIAA0319Q5VV43 1072 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 ZNF280DQ6N043 979 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 TRIM65Q6PJ69 517 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 GPIHBP1Q8IV16 184 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 OR6B3Q8NGW1 331 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 LMO3Q8TAP4 145 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 LNX1Q8TBB1 728 aaPredicted RBP13.31□□□□□ -0.28
GABPB1-208ENST00000558970 PPM1EQ8WY54 764 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 KAT5Q92993 513 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 MRPL38Q96DV4 380 aaKnown RBP13.31□□□□□ -0.28
GABPB1-208ENST00000558970 TMEM209Q96SK2 561 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 NIF3L1Q9GZT8 377 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 SNX25Q9H3E2 840 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 IGFLR1Q9H665 355 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 PRDM6Q9NQX0 595 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 GDAP2Q9NXN4 497 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 DDX43Q9NXZ2 648 aaKnown RBP13.31□□□□□ -0.28
GABPB1-208ENST00000558970 CDY1Q9Y6F8 540 aa13.31□□□□□ -0.28
GABPB1-208ENST00000558970 EYSQ5T1H1 3165 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 FSCN2O14926 492 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 P4HA2O15460 535 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 ADAM12O43184 909 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 STAU1O95793 577 aaKnown RBP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 SPATA31D3P0C874 917 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 CPB1P15086 417 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 LMO2P25791 158 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 PON1P27169 355 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 GTF2F1P35269 517 aaKnown RBP eCLIP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 NRIP1P48552 1158 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 UBASH3AP57075 661 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 PSMC1P62191 440 aaKnown RBP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 KCNMA1Q12791 1236 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 CCDC85BQ15834 202 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 ARHGAP44Q17R89 818 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 LLGL2Q6P1M3 1020 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 RSPO2Q6UXX9 243 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 SPATA31D4Q6ZUB0 917 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 ANKS3Q6ZW76 656 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 PALB2Q86YC2 1186 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 TOP6BLQ8N6T0 577 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 KBTBD7Q8WVZ9 684 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 TAF4BQ92750 862 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 LPIN3Q9BQK8 851 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 LMAN2LQ9H0V9 348 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 DPEP3Q9H4B8 488 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 UBE2TQ9NPD8 197 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 CHST7Q9NS84 486 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 FAM207AQ9NSI2 230 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 HMGXB4Q9UGU5 601 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 AJAP1Q9UKB5 411 aaPredicted RBP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 DSEQ9UL01 958 aa13.3□□□□□ -0.28
GABPB1-208ENST00000558970 MTCL1Q9Y4B5 1905 aaKnown RBP13.3□□□□□ -0.28
GABPB1-208ENST00000558970 ARHGEF37A1IGU5 675 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 C2orf71A6NGG8 1288 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 A8MXQ7 604 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 H7C4K7 107 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 TEX28O15482 410 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 CNPP09543 421 aaKnown RBP13.29□□□□□ -0.28
GABPB1-208ENST00000558970 TYMPP19971 482 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 KLRC2P26717 231 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 OR1D2P34982 312 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 RBM10P98175 930 aaKnown RBP13.29□□□□□ -0.28
GABPB1-208ENST00000558970 CUL2Q13617 745 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 PHLDB3Q6NSJ2 640 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 EP400NLQ6ZTU2 488 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 DPH6Q7L8W6 267 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 THEM5Q8N1Q8 247 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 OR10T2Q8NGX3 314 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 PIK3R5Q8WYR1 880 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 PGLYRP2Q96PD5 576 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 RTP3Q9BQQ7 232 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 XPO4Q9C0E2 1151 aaKnown RBP13.29□□□□□ -0.28
GABPB1-208ENST00000558970 VRTNQ9H8Y1 702 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 SIX2Q9NPC8 291 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 NGRNQ9NPE2 291 aaKnown RBP13.29□□□□□ -0.28
GABPB1-208ENST00000558970 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
GABPB1-208ENST00000558970 APEX2Q9UBZ4 518 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 FBXL5Q9UKA1 691 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 NME7Q9Y5B8 376 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 MTCH2Q9Y6C9 303 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 MYO7AQ13402 2215 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 PTPRDP23468 1912 aa13.29□□□□□ -0.28
GABPB1-208ENST00000558970 A0A1B0GTH6 734 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 GTPBP10A4D1E9 387 aaKnown RBP13.28□□□□□ -0.28
GABPB1-208ENST00000558970 EPHB6O15197 1021 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 PMM2O15305 246 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 ATP2C2O75185 946 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 CALCAP01258 141 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 CYP11A1P05108 521 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 PNMA6AP0CW24 399 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-208ENST00000558970 FOSL2P15408 326 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms