RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 KLHDC4Q8TBB5 520 aa4.72□□□□□ -1.65
VPS13C-207ENST00000558919 SNX19Q92543 992 aa4.72□□□□□ -1.65
VPS13C-207ENST00000558919 ZG16BQ96DA0 208 aa4.72□□□□□ -1.65
VPS13C-207ENST00000558919 MTFMTQ96DP5 389 aaKnown RBP4.72□□□□□ -1.65
VPS13C-207ENST00000558919 SYNPO2LQ9H987 977 aa4.72□□□□□ -1.65
VPS13C-207ENST00000558919 SARS2Q9NP81 518 aaKnown RBP4.72□□□□□ -1.65
VPS13C-207ENST00000558919 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-207ENST00000558919 AGAP1Q9UPQ3 857 aa4.72□□□□□ -1.65
VPS13C-207ENST00000558919 A0A088AWK7 358 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 PEX1O43933 1283 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 AHSGP02765 367 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 FOLR3P41439 243 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 PHKA1P46020 1223 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 MC2RQ01718 297 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 ZNF169Q14929 603 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-207ENST00000558919 PRR16Q569H4 304 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 KIAA0895LQ68EN5 471 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 SLC30A10Q6XR72 485 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 EPM2AIP1Q7L775 607 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-207ENST00000558919 PPP1R32Q7Z5V6 425 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 USP37Q86T82 979 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 CAMKK1Q8N5S9 505 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 TAAR9Q96RI9 348 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 TINAGL1Q9GZM7 467 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-207ENST00000558919 RSAD1Q9HA92 442 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 LRIT1Q9P2V4 623 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 GABBR1Q9UBS5 961 aa4.71□□□□□ -1.66
VPS13C-207ENST00000558919 ZAR1LA6NP61 321 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 YY2O15391 372 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 MPPED1O15442 326 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 UBXN7O94888 489 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 KIF20AO95235 890 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 BMP5P22003 454 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 CXCR5P32302 372 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 NPTX2P47972 431 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 SOX8P57073 446 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 RAB1AP62820 205 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 MRPS35P82673 323 aaKnown RBP4.7□□□□□ -1.66
VPS13C-207ENST00000558919 FGL2Q14314 439 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 PPP2R5AQ15172 486 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 NBPF8Q3BBV2 869 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 KHDC1LQ5JSQ8 128 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 FAM102BQ5T8I3 360 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 FAM160B1Q5W0V3 765 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 NXNQ6DKJ4 435 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 RAVER1Q8IY67 606 aaKnown RBP4.7□□□□□ -1.66
VPS13C-207ENST00000558919 CHPFQ8IZ52 775 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 FAM9AQ8IZU1 332 aaPredicted RBP4.7□□□□□ -1.66
VPS13C-207ENST00000558919 PSD4Q8NDX1 1056 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 PLBD2Q8NHP8 589 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 SLC30A5Q8TAD4 765 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 CAGE1Q8TC20 777 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 PGBD1Q96JS3 809 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 LRGUKQ96M69 825 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 OSBPL9Q96SU4 736 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 ACO2Q99798 780 aaKnown RBP4.7□□□□□ -1.66
VPS13C-207ENST00000558919 ALG13Q9NP73 1137 aaKnown RBP4.7□□□□□ -1.66
VPS13C-207ENST00000558919 FOXJ2Q9P0K8 574 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 ZNHIT2Q9UHR6 403 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 EID1Q9Y6B2 187 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 SALL3Q9BXA9 1300 aa4.7□□□□□ -1.66
VPS13C-207ENST00000558919 A0A0B4J269 797 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 F5H697 171 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 M0QYG6 137 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 TRIAP1O43715 76 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 HDCP19113 662 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 HTR1BP28222 390 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 RARRES1P49788 294 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 NXPH1P58417 271 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 ITIH3Q06033 890 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 EXOSC9Q06265 439 aaKnown RBP4.69□□□□□ -1.66
VPS13C-207ENST00000558919 TUBB3Q13509 450 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 PTPRRQ15256 657 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 MINDY4Q4G0A6 757 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 TAF2Q6P1X5 1199 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 DAAM2Q86T65 1068 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 TCEAL8Q8IYN2 117 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 SIMC1Q8NDZ2 872 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 ACTRT2Q8TDY3 377 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 JDP2Q8WYK2 163 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 LPIN2Q92539 896 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 PDLIM2Q96JY6 352 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 HEPHQ9BQS7 1158 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 LRFN3Q9BTN0 628 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 ANLNQ9NQW6 1124 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 CNNM1Q9NRU3 951 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 MRPS18AQ9NVS2 196 aaKnown RBP4.69□□□□□ -1.66
VPS13C-207ENST00000558919 PCDHA6Q9UN73 950 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 RAD54BQ9Y620 910 aa4.69□□□□□ -1.66
VPS13C-207ENST00000558919 CCDC151A5D8V7 595 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 KIAA0355O15063 1070 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 CTNND1O60716 968 aaKnown RBP4.68□□□□□ -1.66
VPS13C-207ENST00000558919 TUSC2O75896 110 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 DNAJB5O75953 348 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 SCGB1D2O95969 90 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 NUDT3O95989 172 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 PIM1P11309 404 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-207ENST00000558919 PPP3CBP16298 524 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 ITGALP20701 1170 aa4.68□□□□□ -1.66
VPS13C-207ENST00000558919 PLA2G5P39877 138 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms