RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 STK39Q9UEW8 545 aa14.55□□□□□ -0.08
TMED3-205ENST00000558562 NUMBLQ9Y6R0 609 aa14.55□□□□□ -0.08
TMED3-205ENST00000558562 TISP43B9A030 160 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 RNF225M0QZC1 329 aaPredicted RBP14.54□□□□□ -0.08
TMED3-205ENST00000558562 CCP110O43303 1012 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 KRT13P13646 458 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 OR1G1P47890 313 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 ZBED6P86452 979 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 KCNMA1Q12791 1236 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 HTR4Q13639 388 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 E4F1Q66K89 784 aaPredicted RBP14.54□□□□□ -0.08
TMED3-205ENST00000558562 ZNF410Q86VK4 478 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 GLYCTKQ8IVS8 523 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 CCAR2Q8N163 923 aaKnown RBP14.54□□□□□ -0.08
TMED3-205ENST00000558562 XXYLT1Q8NBI6 393 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 ZNF397Q8NF99 534 aaPredicted RBP14.54□□□□□ -0.08
TMED3-205ENST00000558562 OR8K1Q8NGG5 319 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 TMEM174Q8WUU8 243 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 KCNN1Q92952 543 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 NXPE3Q969Y0 559 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 BICD1Q96G01 975 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 BORCS6Q96GS4 357 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 DNAJC7Q99615 494 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 CBWD1Q9BRT8 395 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 HERC2P3Q9BVR0 1158 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 PCIF1Q9H4Z3 704 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 IFT122Q9HBG6 1241 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 FAM207AQ9NSI2 230 aaPredicted RBP14.54□□□□□ -0.08
TMED3-205ENST00000558562 AGPAT5Q9NUQ2 364 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 HSPBP1Q9NZL4 362 aa14.54□□□□□ -0.08
TMED3-205ENST00000558562 PHLPP2Q6ZVD8 1323 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 ANKRD63C9JTQ0 380 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 ANHXE9PGG2 379 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 GLUD2P49448 558 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 GPC5P78333 572 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 STRN3Q13033 797 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 CAPSQ13938 189 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 UBXN11Q5T124 520 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 KIAA0319Q5VV43 1072 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 ELMSAN1Q6PJG2 1045 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 CYP26C1Q6V0L0 522 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.53□□□□□ -0.08
TMED3-205ENST00000558562 TAS1R3Q7RTX0 852 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 MRPL10Q7Z7H8 261 aaKnown RBP14.53□□□□□ -0.08
TMED3-205ENST00000558562 TMTC1Q8IUR5 882 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 SLC35C1Q96A29 364 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 RHOBTB2Q9BYZ6 727 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 MINDY3Q9H8M7 445 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 SPATA6Q9NWH7 488 aaPredicted RBP14.53□□□□□ -0.08
TMED3-205ENST00000558562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.53□□□□□ -0.08
TMED3-205ENST00000558562 KANSL3Q9P2N6 904 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 NCDNQ9UBB6 729 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 DPP7Q9UHL4 492 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 SSX2IPQ9Y2D8 614 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 DOCK6Q96HP0 2047 aa14.53□□□□□ -0.08
TMED3-205ENST00000558562 SOWAHDA6NJG2 315 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 USP27XA6NNY8 438 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 HNRNPDLO14979 420 aaKnown RBP14.52□□□□□ -0.09
TMED3-205ENST00000558562 MAPK13O15264 365 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 TGM5O43548 720 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 BFSP1Q12934 665 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 VARS2Q5ST30 1063 aaKnown RBP14.52□□□□□ -0.09
TMED3-205ENST00000558562 SLC39A4Q6P5W5 647 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 GBP6Q6ZN66 633 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 INTS8Q75QN2 995 aaKnown RBP14.52□□□□□ -0.09
TMED3-205ENST00000558562 COLGALT2Q8IYK4 626 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 PSPC1Q8WXF1 523 aaKnown RBP14.52□□□□□ -0.09
TMED3-205ENST00000558562 CRACR2AQ9BSW2 395 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 EDEM3Q9BZQ6 932 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 RXFP1Q9HBX9 757 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 SLC2A4RGQ9NR83 387 aa14.52□□□□□ -0.09
TMED3-205ENST00000558562 ZNHIT6Q9NWK9 470 aaKnown RBP14.52□□□□□ -0.09
TMED3-205ENST00000558562 TRMT1Q9NXH9 659 aaKnown RBP14.52□□□□□ -0.09
TMED3-205ENST00000558562 MTF2Q9Y483 593 aaPredicted RBP14.52□□□□□ -0.09
TMED3-205ENST00000558562 MIA3Q5JRA6 1907 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 CNTNAP2Q9UHC6 1331 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 EPHB6O15197 1021 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 PIGRP01833 764 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 SRGAP2CP0DJJ0 459 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 RPL17P18621 184 aaKnown RBP14.51□□□□□ -0.09
TMED3-205ENST00000558562 GARTP22102 1010 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 HOXA11P31270 313 aaPredicted RBP14.51□□□□□ -0.09
TMED3-205ENST00000558562 LIG4P49917 911 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 ATXN1P54253 815 aaKnown RBP14.51□□□□□ -0.09
TMED3-205ENST00000558562 STARD6P59095 220 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 CSTF1Q05048 431 aaKnown RBP14.51□□□□□ -0.09
TMED3-205ENST00000558562 MXD4Q14582 209 aaPredicted RBP14.51□□□□□ -0.09
TMED3-205ENST00000558562 EXOC3L4Q17RC7 722 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 DNTTIP2Q5QJE6 756 aaKnown RBP14.51□□□□□ -0.09
TMED3-205ENST00000558562 PARM1Q6UWI2 310 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 CACNA2D4Q7Z3S7 1137 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 ZBTB8OSQ8IWT0 167 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 RNF168Q8IYW5 571 aaPredicted RBP14.51□□□□□ -0.09
TMED3-205ENST00000558562 RDH13Q8NBN7 331 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 PRPF31Q8WWY3 499 aaKnown RBP14.51□□□□□ -0.09
TMED3-205ENST00000558562 POMGNT1Q8WZA1 660 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 FGF14Q92915 247 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 PPP1R13BQ96KQ4 1090 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 GAD1Q99259 594 aa14.51□□□□□ -0.09
TMED3-205ENST00000558562 PRKD2Q9BZL6 878 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms