RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 CFAP73A6NFT4 308 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 SARNPP82979 210 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 PIGHQ14442 188 aaPredicted RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 VSIG10LQ86VR7 867 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 FAM167AQ96KS9 214 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 METTL5Q9NRN9 209 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 PPARGC1AQ9UBK2 798 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 XPO7Q9UIA9 1087 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 IRS2Q9Y4H2 1338 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 PGK2P07205 417 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 RPL7AP62424 266 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 GRM1Q13255 1194 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 CCNG2Q16589 344 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 ARHGAP24Q8N264 748 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 RDM1Q8NG50 284 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 KAT2BQ92831 832 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 R3HDM2Q9Y2K5 976 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 CTCFP49711 727 aaPredicted RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 TFDP2Q14188 446 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 EXOC3L1Q86VI1 746 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 ACTL9Q8TC94 416 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 A1CFQ9NQ94 594 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 G3BP2Q9UN86 482 aaKnown RBP16.28■□□□□ 0.2
AP4E1-202ENST00000558439 STXBP5LQ9Y2K9 1186 aa16.28■□□□□ 0.2
AP4E1-202ENST00000558439 CYP1A2P05177 515 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 DRD4P21917 467 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 GCKP35557 465 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 CLCN3P51790 818 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 CDH8P55286 799 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 ROR1Q01973 937 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 PCGF5Q86SE9 256 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 TOGARAM1Q9Y4F4 1720 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 GYG2O15488 501 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 KCNN4O15554 427 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 PSTPIP1O43586 416 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 PEX10O60683 326 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 FSBPO95073 299 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 PECAM1P16284 738 aaPredicted RBP16.27■□□□□ 0.2
AP4E1-202ENST00000558439 TARSP26639 723 aaKnown RBP16.27■□□□□ 0.2
AP4E1-202ENST00000558439 OTUD4Q01804 1114 aaKnown RBP16.27■□□□□ 0.2
AP4E1-202ENST00000558439 KLHL38Q2WGJ6 581 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 CCDC14Q49A88 953 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 NIPA1Q7RTP0 329 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 FUKQ8N0W3 1084 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 OR5B17Q8NGF7 314 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 FAM49BQ9NUQ9 324 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 MARCOQ9UEW3 520 aaPredicted RBP16.27■□□□□ 0.2
AP4E1-202ENST00000558439 L3MBTL1Q9Y468 752 aa16.27■□□□□ 0.2
AP4E1-202ENST00000558439 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.19
AP4E1-202ENST00000558439 KRT37O76014 449 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 SDC4P31431 198 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 TAS2R40P59535 323 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 APBB1IPQ7Z5R6 666 aaPredicted RBP16.27■□□□□ 0.19
AP4E1-202ENST00000558439 SDCCAG8Q86SQ7 713 aaPredicted RBP16.27■□□□□ 0.19
AP4E1-202ENST00000558439 TRAPPC12Q8WVT3 735 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 DHX35Q9H5Z1 703 aaKnown RBP16.27■□□□□ 0.19
AP4E1-202ENST00000558439 ELP3Q9H9T3 547 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 ZMYM2Q9UBW7 1377 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 CREB1P16220 341 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 PSMC4P43686 418 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 ATF7IP2Q5U623 682 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 TDRD10Q5VZ19 366 aaKnown RBP16.27■□□□□ 0.19
AP4E1-202ENST00000558439 XRRA1Q6P2D8 792 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 C3orf20Q8ND61 904 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 TMEM59LQ9UK28 342 aa16.27■□□□□ 0.19
AP4E1-202ENST00000558439 C19orf81C9J6K1 198 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 TXNDC9O14530 226 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 ZC3H11AO75152 810 aaKnown RBP eCLIP16.26■□□□□ 0.19
AP4E1-202ENST00000558439 CHRNB2P17787 502 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 NAMPTP43490 491 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 NOVP48745 357 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 ARFIP2P53365 341 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 TMEM62Q0P6H9 643 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 CNGA2Q16280 664 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 MDH1BQ5I0G3 518 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 EXD1Q8NHP7 514 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 PSMC3IPQ9P2W1 217 aaPredicted RBP16.26■□□□□ 0.19
AP4E1-202ENST00000558439 SSTR1P30872 391 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 DRG2P55039 364 aaKnown RBP16.26■□□□□ 0.19
AP4E1-202ENST00000558439 COPS2P61201 443 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 HELQQ8TDG4 1101 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 ASAP3Q8TDY4 903 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 KLC2Q9H0B6 622 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 ITGB3P05106 788 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 CALRP27797 417 aaKnown RBP16.26■□□□□ 0.19
AP4E1-202ENST00000558439 ADSSP30520 456 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 MMP14P50281 582 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 HSD17B4P51659 736 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 EFCAB12Q6NXP0 572 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 SPOCD1Q6ZMY3 1216 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 CATSPER4Q7RTX7 472 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 DNAAF3Q8N9W5 541 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 KIF12Q96FN5 646 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 C2orf40Q9H1Z8 148 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 HAO1Q9UJM8 370 aa16.26■□□□□ 0.19
AP4E1-202ENST00000558439 PHTF1Q9UMS5 762 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms