RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ARHGAP6O43182 974 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 CCP110O43303 1012 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 TLL1O43897 1013 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 CSPG5O95196 566 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 CYP11A1P05108 521 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 GALTP07902 379 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 FECHP22830 423 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 GNL1P36915 607 aaPredicted RBP13.24□□□□□ -0.29
TPM1-209ENST00000558072 BCAR1P56945 870 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 KRT17Q04695 432 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 TDRD12Q587J7 1177 aaKnown RBP13.24□□□□□ -0.29
TPM1-209ENST00000558072 TMEM270Q6UE05 265 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 LIMS2Q7Z4I7 341 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 GPR65Q8IYL9 337 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 ADGRF2Q8IZF7 708 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 HASPINQ8TF76 798 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 TMEM169Q96HH4 297 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 KREMEN1Q96MU8 473 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 PRO3102Q9H379 93 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 PUF60Q9UHX1 559 aaKnown RBP13.24□□□□□ -0.29
TPM1-209ENST00000558072 MRPL42Q9Y6G3 142 aaKnown RBP13.24□□□□□ -0.29
TPM1-209ENST00000558072 NLRC5Q86WI3 1866 aa13.24□□□□□ -0.29
TPM1-209ENST00000558072 A8MXQ7 604 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 NT5C1B-RDH14C9J2C7 533 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 CILPO75339 1184 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 VDRP11473 427 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 BMP8BP34820 402 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 SNX16P57768 344 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 CREMQ03060 361 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 SMARCB1Q12824 385 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 MAPK8IP2Q13387 824 aaPredicted RBP13.23□□□□□ -0.29
TPM1-209ENST00000558072 C10orf76Q5T2E6 689 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 GJB7Q6PEY0 223 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 KCNT2Q6UVM3 1135 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.23□□□□□ -0.29
TPM1-209ENST00000558072 TRIM72Q6ZMU5 477 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 RBBP8NLQ8NC74 664 aaPredicted RBP13.23□□□□□ -0.29
TPM1-209ENST00000558072 OR6B3Q8NGW1 331 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 BCL7CQ8WUZ0 217 aaPredicted RBP13.23□□□□□ -0.29
TPM1-209ENST00000558072 TMEM176AQ96HP8 235 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 PLVAPQ9BX97 442 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 PDCL3Q9H2J4 239 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 SPG21Q9NZD8 308 aa13.23□□□□□ -0.29
TPM1-209ENST00000558072 COLQQ9Y215 455 aaPredicted RBP13.23□□□□□ -0.29
TPM1-209ENST00000558072 COL4A4P53420 1690 aaPredicted RBP13.22□□□□□ -0.29
TPM1-209ENST00000558072 ATP8B3O60423 1300 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 AKR1B10O60218 316 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 ITGB1P05556 798 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 RB1P06400 928 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 WEE2P0C1S8 567 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 CD58P19256 250 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 ACO1P21399 889 aaKnown RBP13.22□□□□□ -0.29
TPM1-209ENST00000558072 TNFAIP3P21580 790 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 GNA15P30679 374 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 DEKP35659 375 aaKnown RBP13.22□□□□□ -0.29
TPM1-209ENST00000558072 SLC11A1P49279 550 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 SLC8A3P57103 927 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 KRT83P78385 493 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 TSPY1Q01534 308 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 APBA1Q02410 837 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 YWHAHQ04917 246 aaPredicted RBP13.22□□□□□ -0.29
TPM1-209ENST00000558072 SPA17Q15506 151 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 SOWAHAQ2M3V2 549 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 USP41Q3LFD5 358 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 TIGD5Q53EQ6 642 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 SCARA5Q6ZMJ2 495 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 ANKS3Q6ZW76 656 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 IRF2BP2Q7Z5L9 587 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 TMEM173Q86WV6 379 aaPredicted RBP13.22□□□□□ -0.29
TPM1-209ENST00000558072 PDCL2Q8N4E4 241 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 UBR7Q8N806 425 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 C3orf58Q8NDZ4 430 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
TPM1-209ENST00000558072 ACBD6Q9BR61 282 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 MIS12Q9H081 205 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 NKX2-4Q9H2Z4 354 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 CWH43Q9H720 699 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 CDH9Q9ULB4 789 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 POLIQ9UNA4 740 aa13.22□□□□□ -0.29
TPM1-209ENST00000558072 PRG3Q9Y2Y8 225 aaPredicted RBP13.22□□□□□ -0.29
TPM1-209ENST00000558072 PLXNA4Q9HCM2 1894 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 TSC2P49815 1807 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.21□□□□□ -0.29
TPM1-209ENST00000558072 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.21□□□□□ -0.29
TPM1-209ENST00000558072 OR6C75A6NL08 312 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 I3L4J1 428 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 GABRDO14764 452 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 SPTLC1O15269 473 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 CYP26A1O43174 497 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 LINC00271P0C7V0 271 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 SKILP12757 684 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 CYP11B1P15538 503 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 ZNF132P52740 706 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 ARID5AQ03989 594 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 RAB30Q15771 203 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 SGO2Q562F6 1265 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 OVOS1Q6IE37 1185 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 KIAA1841Q6NSI8 718 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 FUT10Q6P4F1 479 aa13.21□□□□□ -0.29
TPM1-209ENST00000558072 DCP1BQ8IZD4 617 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms