RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PIGOQ8TEQ8 1089 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 FAM3CQ92520 227 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 CHAMP1Q96JM3 812 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 PRIMPOLQ96LW4 560 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 ZSWIM3Q96MP5 696 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 CCDC43Q96MW1 224 aaKnown RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 EIF2AK1Q9BQI3 630 aaKnown RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 CORO1BQ9BR76 489 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 IER2Q9BTL4 223 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 TRMT61BQ9BVS5 477 aaKnown RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 ACBD3Q9H3P7 528 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 FZD8Q9H461 694 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 ZFP14Q9HCL3 533 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 AVENQ9NQS1 362 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 GJB4Q9NTQ9 266 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 ANKEF1Q9NU02 776 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 PRMT7Q9NVM4 692 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 USP20Q9Y2K6 914 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 GDAQ9Y2T3 454 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 BACE2Q9Y5Z0 518 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 PIAS3Q9Y6X2 628 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 COL4A2P08572 1712 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 NCANO14594 1321 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 WDR27A2RRH5 827 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 FIGNL2A6NMB9 653 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 HMGB1P1B2RPK0 211 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 CHURC1-FNTBB4DL54 471 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 TMEM189-UBE2V1I3L0A0 370 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 PRRG1O14668 218 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 N4BP3O15049 544 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 DTNBO60941 627 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 B3GAT3O94766 335 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 LRG1P02750 347 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 CHRNB1P11230 501 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 PTPN2P17706 415 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 LORP23490 312 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 PSMA5P28066 241 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 GDI1P31150 447 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 VIPR2P41587 438 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 BRCC3P46736 316 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 CXCL12P48061 93 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 FNTBP49356 437 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 CCR3P51677 355 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 CLCNKBP51801 687 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 FANCCQ00597 558 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 ROR1Q01973 937 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 STK3Q13188 491 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 PRPF4BQ13523 1007 aaKnown RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 NCOA4Q13772 614 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 SIM2Q14190 667 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 GAS6Q14393 721 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 FAM187BQ17R55 369 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 GLRA4Q5JXX5 417 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 EEF1DP3Q658K8 133 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 SLC8B1Q6J4K2 584 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 VITQ6UXI7 678 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 ANKS3Q6ZW76 656 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 MAP4K3Q8IVH8 894 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 ZBTB8OSQ8IWT0 167 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 C3orf58Q8NDZ4 430 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 ZNF461Q8TAF7 563 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 BSNDQ8WZ55 320 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 PPP1R10Q96QC0 940 aaKnown RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 NAP1L4Q99733 375 aaKnown RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 CCDC113Q9H0I3 377 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 OSBPL2Q9H1P3 480 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 LMAN1LQ9HAT1 526 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 GOLGA2P5Q9HBQ8 144 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 ZNF334Q9HCZ1 680 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 RBM12Q9NTZ6 932 aaKnown RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 ANGPTL2Q9UKU9 493 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 ANKRD11Q6UB99 2663 aaPredicted RBP6.43□□□□□ -1.38
VPS33B-207ENST00000557470 SPEGQ15772 3267 aa6.43□□□□□ -1.38
VPS33B-207ENST00000557470 LAMA1P25391 3075 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 TTLL8A6PVC2 850 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 K7ESF4 209 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 ERVH48-1M5A8F1 160 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 ARNTLO00327 626 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 MOSPD3O75425 235 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 MICAL2O94851 1124 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 ABLIM3O94929 683 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 BAG4O95429 457 aaKnown RBP6.42□□□□□ -1.38
VPS33B-207ENST00000557470 SEC24AO95486 1093 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 PRKCBP05771 671 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 GJA1P17302 382 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 PSMC3P17980 439 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 LIG1P18858 919 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 CCNE1P24864 410 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 PMLP29590 882 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 HOXC13P31276 330 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 ELF1P32519 619 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 ARPP19P56211 112 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 RELBQ01201 579 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 ARID5AQ03989 594 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 SOX4Q06945 474 aaPredicted RBP6.42□□□□□ -1.38
VPS33B-207ENST00000557470 DHX9Q08211 1270 aaKnown RBP6.42□□□□□ -1.38
VPS33B-207ENST00000557470 CALCRLQ16602 461 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 ECM1Q16610 540 aa6.42□□□□□ -1.38
VPS33B-207ENST00000557470 MAPK6Q16659 721 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms