RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 PRR33A8MZF0 331 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 TRIM21P19474 475 aaKnown RBP14.84□□□□□ -0.03
VPS33B-206ENST00000557358 PPP1R2P41236 205 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 TNNC1P63316 161 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 SIGLEC14Q08ET2 396 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 TWF1Q12792 350 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 PNOCQ13519 176 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 NFE2Q16621 373 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-206ENST00000557358 SLC39A12Q504Y0 691 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 MTSS1LQ765P7 747 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 TRAPPC11Q7Z392 1133 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 FAM200AQ8TCP9 573 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 SPPL2BQ8TCT7 592 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 TMEM174Q8WUU8 243 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 SYAP1Q96A49 352 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-206ENST00000557358 MFSD14AQ96MC6 490 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 GBP4Q96PP9 640 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 MMS19Q96T76 1030 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 KCTD10Q9H3F6 313 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 ASAH2Q9NR71 780 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 EPS15L1Q9UBC2 864 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 CDH7Q9ULB5 785 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 TRAF3IP3Q9Y228 551 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 ASB3Q9Y575 518 aa14.84□□□□□ -0.03
VPS33B-206ENST00000557358 FGF19O95750 216 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 RHOP08100 348 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 OR4Q2P0C623 313 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 P4HA1P13674 534 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 NR2F2P24468 414 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 ATICP31939 592 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 WNT7BP56706 349 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 DUSP4Q13115 394 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 TDGQ13569 410 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 NFIL3Q16649 462 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 MGAT5BQ3V5L5 792 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 ZNF658Q5TYW1 1059 aaPredicted RBP14.83□□□□□ -0.04
VPS33B-206ENST00000557358 CLEC17AQ6ZS10 378 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 INTS8Q75QN2 995 aaKnown RBP14.83□□□□□ -0.04
VPS33B-206ENST00000557358 ELOA2Q8IYF1 753 aaPredicted RBP14.83□□□□□ -0.04
VPS33B-206ENST00000557358 ADGRF2Q8IZF7 708 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 TMEM130Q8N3G9 435 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 PDCL2Q8N4E4 241 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 CCDC150Q8NCX0 1101 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 OR5B17Q8NGF7 314 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 KHSRPQ92945 711 aaKnown RBP eCLIP14.83□□□□□ -0.04
VPS33B-206ENST00000557358 ACBD6Q9BR61 282 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 CORO1BQ9BR76 489 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 DNAI2Q9GZS0 605 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 ZCWPW1Q9H0M4 648 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 DMAC2Q9NW81 257 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 DDX43Q9NXZ2 648 aaKnown RBP14.83□□□□□ -0.04
VPS33B-206ENST00000557358 MAPK8IP1Q9UQF2 711 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 HCN4Q9Y3Q4 1203 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 PCDHB5Q9Y5E4 795 aa14.83□□□□□ -0.04
VPS33B-206ENST00000557358 MUC3AQ02505 3323 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 MTMR11A4FU01 709 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 CETN3O15182 167 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 MAPK13O15264 365 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 SEC24AO95486 1093 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 ASGR2P07307 311 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 LAMP2P13473 410 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 PSMC2P35998 433 aaKnown RBP14.82□□□□□ -0.04
VPS33B-206ENST00000557358 UBE2HP62256 183 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 ADAM9Q13443 819 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 SNW1Q13573 536 aaKnown RBP14.82□□□□□ -0.04
VPS33B-206ENST00000557358 MAPRE1Q15691 268 aaKnown RBP14.82□□□□□ -0.04
VPS33B-206ENST00000557358 CENPPQ6IPU0 288 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 TRIM67Q6ZTA4 783 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 SUGP1Q8IWZ8 645 aaKnown RBP14.82□□□□□ -0.04
VPS33B-206ENST00000557358 ENGASEQ8NFI3 743 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 TMC2Q8TDI7 906 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 GCNAQ96QF7 691 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 SEPT5Q99719 369 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-206ENST00000557358 IMPG2Q9BZV3 1241 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 SNX25Q9H3E2 840 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 KCNK12Q9HB15 430 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 AVENQ9NQS1 362 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-206ENST00000557358 GDE1Q9NZC3 331 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 DNMT3BQ9UBC3 853 aaKnown RBP14.82□□□□□ -0.04
VPS33B-206ENST00000557358 SIX4Q9UIU6 781 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 FBXL21Q9UKT6 434 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 YIPF1Q9Y548 306 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 DOCK6Q96HP0 2047 aa14.82□□□□□ -0.04
VPS33B-206ENST00000557358 FAM86C2PA6NEL3 165 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 TMEM221A6NGB7 291 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 M0R296 226 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 PSMA7O14818 248 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 IKBKBO14920 756 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 STX10O60499 249 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 MICAL2O94851 1124 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 FAM163BP0C2L3 166 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 EPB41P11171 864 aaKnown RBP14.81□□□□□ -0.04
VPS33B-206ENST00000557358 RFX1P22670 979 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 NTHL1P78549 312 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 EDRF1Q3B7T1 1238 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 WDR72Q3MJ13 1102 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 C4orf50Q6ZRC1 276 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 FAM186BQ8IYM0 893 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 ATAD1Q8NBU5 361 aa14.81□□□□□ -0.04
VPS33B-206ENST00000557358 PARD3BQ8TEW8 1205 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms