RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 DTNBO60941 627 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 NDUFS2O75306 463 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 RHOBTB3O94955 611 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 SCAF4O95104 1147 aaKnown RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 C1SP09871 688 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 OSMP13725 252 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 GYS1P13807 737 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 BMPR1AP36894 532 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 RECQLP46063 649 aaPredicted RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 CDKN1CP49918 316 aaPredicted RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 CCT2P78371 535 aaKnown RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 CREMQ03060 361 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 PPP3CAQ08209 521 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 ITPK1Q13572 414 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 RAB39AQ14964 217 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 ACAP2Q15057 778 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 FAM214AQ32MH5 1076 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 THEMIS2Q5TEJ8 643 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 C1QL3Q5VWW1 255 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 Q6ZVL8 140 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 GDF7Q7Z4P5 450 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 C2CD5Q86YS7 1000 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 CBARPQ8N350 705 aaPredicted RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 OR10H5Q8NGA6 315 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 MYEOVQ96EZ4 313 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 MRIQ9BWK5 157 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 SCAND2PQ9GZW5 306 aaPredicted RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 SRP68Q9UHB9 627 aaKnown RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 ATP11BQ9Y2G3 1177 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 REXO2Q9Y3B8 237 aaKnown RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 CFAP20Q9Y6A4 193 aaKnown RBP4.89□□□□□ -1.63
CHD8-212ENST00000557329 ADGRB1O14514 1584 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 LY75O60449 1722 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 C4BP0C0L5 1744 aa4.89□□□□□ -1.63
CHD8-212ENST00000557329 E2F8A0AVK6 867 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 GRXCR1A8MXD5 290 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 CXorf49A8MYA2 514 aaPredicted RBP4.88□□□□□ -1.63
CHD8-212ENST00000557329 NPIPB8E9PQR5 432 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 H0YIN7 160 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 PPM1GO15355 546 aaPredicted RBP4.88□□□□□ -1.63
CHD8-212ENST00000557329 XPOTO43592 962 aaKnown RBP4.88□□□□□ -1.63
CHD8-212ENST00000557329 NARSO43776 548 aaKnown RBP4.88□□□□□ -1.63
CHD8-212ENST00000557329 GPR32O75388 356 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 SNUPNO95149 360 aaKnown RBP4.88□□□□□ -1.63
CHD8-212ENST00000557329 ARIH2O95376 493 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 IGBP1P78318 339 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 CDC42EP1Q00587 391 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 PTPAQ15257 358 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 SPDYE7PQ495Y7 208 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 TIGD2Q4W5G0 525 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 SEM1Q6ZVN7 128 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 ULK2Q8IYT8 1036 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 CNTROBQ8N137 903 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 FAM43AQ8N2R8 423 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 AOPEPQ8N6M6 819 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 CPT1CQ8TCG5 803 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 PGBD4Q96DM1 585 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 COG3Q96JB2 828 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 CAPNS2Q96L46 248 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 MRI1Q9BV20 369 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 FAM126AQ9BYI3 521 aaPredicted RBP4.88□□□□□ -1.63
CHD8-212ENST00000557329 SLITRK6Q9H5Y7 841 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 TDP1Q9NUW8 608 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 CALCOCO1Q9P1Z2 691 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.88□□□□□ -1.63
CHD8-212ENST00000557329 PCDH11XQ9BZA7 1347 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 PCDH11YQ9BZA8 1340 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 PKD1L3Q7Z443 1732 aa4.88□□□□□ -1.63
CHD8-212ENST00000557329 SLC16A6O15403 523 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 SLPIP03973 132 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 RAP2AP10114 183 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 MTHFD1P11586 935 aaKnown RBP4.87□□□□□ -1.63
CHD8-212ENST00000557329 HOXC9P31274 260 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 INHBCP55103 352 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 CTXN1P60606 82 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 NHLH2Q02577 135 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 RRS1Q15050 365 aaKnown RBP4.87□□□□□ -1.63
CHD8-212ENST00000557329 MFSD14BQ5SR56 506 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 DACT2Q5SW24 774 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 AFMIDQ63HM1 303 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 LRRC55Q6ZSA7 311 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 TTC7BQ86TV6 843 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 RSPH3Q86UC2 560 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 XYLT1Q86Y38 959 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 RHOT2Q8IXI1 618 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 Q8N1X5 172 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 MIER2Q8N344 545 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 JADE3Q92613 823 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 MED15Q96RN5 788 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 CPEB1Q9BZB8 566 aaKnown RBP4.87□□□□□ -1.63
CHD8-212ENST00000557329 RNPEPQ9H4A4 650 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 NRDE2Q9H7Z3 1164 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 GNL3LQ9NVN8 582 aaKnown RBP4.87□□□□□ -1.63
CHD8-212ENST00000557329 TRPM5Q9NZQ8 1165 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 AJAP1Q9UKB5 411 aaPredicted RBP4.87□□□□□ -1.63
CHD8-212ENST00000557329 INTUQ9ULD6 942 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 HS3ST3A1Q9Y663 406 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 ATRNL1Q5VV63 1379 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 C10orf71Q711Q0 1435 aa4.87□□□□□ -1.63
CHD8-212ENST00000557329 DRGXA6NNA5 263 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms