RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CASP12Q6UXS9 341 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 TRIM49BA6NDI0 452 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 ASB14A6NK59 587 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 TRIM49D1C9J1S8 452 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 E9PBE3 544 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 MMP1P03956 469 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 GCKRQ14397 625 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 RGS21Q2M5E4 152 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 CNOT8Q9UFF9 292 aaKnown RBP9.19□□□□□ -0.94
SYNE3-205ENST00000557275 NOS1P29475 1434 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 ACEP12821 1306 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 CNPP09543 421 aaKnown RBP9.19□□□□□ -0.94
SYNE3-205ENST00000557275 MSR1P21757 451 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 TTC27Q6P3X3 843 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 UNC13DQ70J99 1090 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 POLNQ7Z5Q5 900 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 CCT8L1PA6NM43 557 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 GNB5O14775 395 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 GNPATO15228 680 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 STAT3P40763 770 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 PTPROQ16827 1216 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 AADATQ8N5Z0 425 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 NXF1Q9UBU9 619 aaKnown RBP9.19□□□□□ -0.94
SYNE3-205ENST00000557275 LSM7Q9UK45 103 aaKnown RBP9.19□□□□□ -0.94
SYNE3-205ENST00000557275 PRXQ9BXM0 1461 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 HPGDP15428 266 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 EXOSC10Q01780 885 aaKnown RBP9.19□□□□□ -0.94
SYNE3-205ENST00000557275 TRAF3Q13114 568 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 MYH3P11055 1940 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 A0A1W2PQC6 194 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 MDM4O15151 490 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 CYP51A1Q16850 503 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 SCARA3Q6AZY7 606 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 TUBA3EQ6PEY2 450 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 ULK3Q6PHR2 472 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 EID3Q8N140 333 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 CACTIN-AS1Q8N1I8 211 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 ACOT12Q8WYK0 555 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 TRPV3Q8NET8 790 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 RAD18Q9NS91 495 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 COMMD8Q9NX08 183 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 ADAMTS1Q9UHI8 967 aa9.19□□□□□ -0.94
SYNE3-205ENST00000557275 ALOX5P09917 674 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 THRAP10827 490 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF23P17027 643 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 GTF2E2P29084 291 aaKnown RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ARSEP51690 589 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ITGB3BPQ13352 177 aaPredicted RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 GNA13Q14344 377 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 UBE3CQ15386 1083 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 CDO1Q16878 200 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ANKRD13CQ8N6S4 541 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ERBB4Q15303 1308 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 CYP2D7A0A087X1C5 515 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 SAGE2PA6NJ88 616 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 SMIM22K7EJ46 135 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 EXOC3L1Q86VI1 746 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 GRIK1P39086 918 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 PPP3CCP48454 512 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 IDI1Q13907 227 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 MAPK6Q16659 721 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 UNC45BQ8IWX7 931 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ATPAF2Q8N5M1 289 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 NOS3P29474 1203 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 QARSP47897 775 aaKnown RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 TRIP13Q15645 432 aaPredicted RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 MAPK11Q15759 364 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 GALNT18Q6P9A2 607 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 MED15Q96RN5 788 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 HSPBP1Q9NZL4 362 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF112Q9UJU3 913 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 CENPAP49450 140 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ARHGEF7Q14155 803 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 NFIL3Q16649 462 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 PGBD4Q96DM1 585 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 MPP4Q96JB8 637 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 PHF11Q9UIL8 331 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 EDC4Q6P2E9 1401 aaKnown RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 FAM58BPP0C7Q3 252 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 YWHAQP27348 245 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 GUCY1A2P33402 732 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 FAM98BQ52LJ0 330 aaKnown RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ARMC6Q6NXE6 501 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 DCPSQ96C86 337 aaKnown RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 PFDN2Q9UHV9 154 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 EFCAB10A6NFE3 127 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 LSP1P33241 339 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 POU4F1Q01851 419 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 KCNH2Q12809 1159 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 KCTD17Q8N5Z5 321 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 Q96MT0 163 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 CIDEBQ9UHD4 219 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 POTECB2RU33 542 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ALOX15P16050 662 aaPredicted RBP9.18□□□□□ -0.94
SYNE3-205ENST00000557275 NAA20P61599 178 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF846Q147U1 533 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF518AQ6AHZ1 1483 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 F8VZ95 297 aa9.18□□□□□ -0.94
SYNE3-205ENST00000557275 MYL12BO14950 172 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms