RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NEMFO60524 1076 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 CCNT1O60563 726 aaKnown RBP4.98□□□□□ -1.61
SRP54-212ENST00000556992 PLA2G6O60733 806 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 KLHL18O94889 574 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 GH2P01242 217 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 GCFC2P16383 781 aaKnown RBP4.98□□□□□ -1.61
SRP54-212ENST00000556992 SLC16A2P36021 539 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 AMPD3Q01432 767 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 PNOCQ13519 176 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 MORC3Q14149 939 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 IL17AQ16552 155 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 LETM2Q2VYF4 491 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 DPCR1Q3MIW9 517 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 NRN1LQ496H8 165 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 EMC4Q5J8M3 183 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 JAKMIP3Q5VZ66 844 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 RRAGBQ5VZM2 374 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 PPP4R3AQ6IN85 833 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 C11orf57Q6ZUT1 292 aaPredicted RBP4.98□□□□□ -1.61
SRP54-212ENST00000556992 USP49Q70CQ1 688 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 KCTD1Q719H9 257 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 PLA2G4DQ86XP0 818 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 DHX40Q8IX18 779 aaKnown RBP4.98□□□□□ -1.61
SRP54-212ENST00000556992 PDILTQ8N807 584 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 PIP4K2CQ8TBX8 421 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 TBCKQ8TEA7 893 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 COA7Q96BR5 231 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 DHX58Q96C10 678 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 AMNQ9BXJ7 453 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 RAB34Q9BZG1 259 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 CCSER1Q9C0I3 900 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 LRRC27Q9C0I9 530 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 CPVLQ9H3G5 476 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 DNAJC18Q9H819 358 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 MAGEF1Q9HAY2 307 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 VEZTQ9HBM0 779 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 MYOZ2Q9NPC6 264 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 PNMA2Q9UL42 364 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.98□□□□□ -1.61
SRP54-212ENST00000556992 ZKSCAN5Q9Y2L8 839 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 TMX2Q9Y320 296 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 LAMB2P55268 1798 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 TIAM2Q8IVF5 1701 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 TNRC6CQ9HCJ0 1690 aaKnown RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 COL2A1P02458 1487 aaPredicted RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 CYP3A7-CYP3A51PA0A087WV96 503 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 TMEM232C9JQI7 657 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 H7BY64 318 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 FZD9O00144 591 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 WNT10BO00744 389 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 ZNF500O60304 480 aaPredicted RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 MARCH6O60337 910 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 MSCO60682 206 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 CTNND1O60716 968 aaKnown RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 CYP7B1O75881 506 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 DGKIO75912 1065 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 NDUFB10O96000 172 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 ASNSP08243 561 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 OR52Z1P0C646 297 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 ZNF888P0CJ79 500 aaPredicted RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 NAT2P11245 290 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 CYP3A7P24462 503 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 HOXA7P31268 230 aaPredicted RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 HOXC12P31275 282 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 LTBRP36941 435 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 STAT6P42226 847 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 GRIA2P42262 883 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 GJA8P48165 433 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 MYL5Q02045 173 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 IKQ13123 557 aaPredicted RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 RASA3Q14644 834 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 TMEM266Q2M3C6 531 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 QRICH1Q2TAL8 776 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 USP39Q53GS9 565 aaKnown RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 SYDE2Q5VT97 1194 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 FAM160B2Q86V87 743 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 NT5DC4Q86YG4 428 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 AOPEPQ8N6M6 819 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 STPG3Q8N7X2 389 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 GIMAP8Q8ND71 665 aaPredicted RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 RASSF8Q8NHQ8 419 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 CLEC4DQ8WXI8 215 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 ERCC4Q92889 916 aaPredicted RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 CCDC47Q96A33 483 aaKnown RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 CALML4Q96GE6 196 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 MTMR9Q96QG7 549 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 LMF1Q96S06 567 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 EPB41L1Q9H4G0 881 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 ASH2LQ9UBL3 628 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 LRWD1Q9UFC0 647 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 CNOT7Q9UIV1 285 aaKnown RBP4.97□□□□□ -1.61
SRP54-212ENST00000556992 ZFP69BQ9UJL9 534 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 MAN1B1Q9UKM7 699 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 SNED1Q8TER0 1413 aa4.97□□□□□ -1.61
SRP54-212ENST00000556992 CACNA1SQ13698 1873 aa4.96□□□□□ -1.61
SRP54-212ENST00000556992 A0A1W2PRG0 241 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 SCAMP3O14828 347 aaKnown RBP4.96□□□□□ -1.62
SRP54-212ENST00000556992 ADAMTS3O15072 1205 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 FOXN1O15353 648 aa4.96□□□□□ -1.62
SRP54-212ENST00000556992 AP5Z1O43299 807 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms