RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 OVOS1Q6IE37 1185 aa24.21■■□□□ 1.47
PABPN1-206ENST00000556809 CAVIN1Q6NZI2 390 aaKnown RBP24.21■■□□□ 1.47
PABPN1-206ENST00000556809 INTS8Q75QN2 995 aaKnown RBP24.21■■□□□ 1.47
PABPN1-206ENST00000556809 TCEAL8Q8IYN2 117 aa24.21■■□□□ 1.47
PABPN1-206ENST00000556809 TDRD5Q8NAT2 981 aaKnown RBP24.21■■□□□ 1.47
PABPN1-206ENST00000556809 TMC2Q8TDI7 906 aa24.21■■□□□ 1.47
PABPN1-206ENST00000556809 SYAP1Q96A49 352 aaPredicted RBP24.21■■□□□ 1.47
PABPN1-206ENST00000556809 DUSP9Q99956 384 aaKnown RBP24.21■■□□□ 1.47
PABPN1-206ENST00000556809 PIDD1Q9HB75 910 aa24.21■■□□□ 1.47
PABPN1-206ENST00000556809 RWDD2AQ9UIY3 292 aa24.21■■□□□ 1.47
PABPN1-206ENST00000556809 LRRIQ3A6PVS8 624 aaPredicted RBP24.2■■□□□ 1.46
PABPN1-206ENST00000556809 SLC16A3O15427 465 aaKnown RBP24.2■■□□□ 1.46
PABPN1-206ENST00000556809 GPR37L1O60883 481 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 SEC24AO95486 1093 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 EPB41P11171 864 aaKnown RBP24.2■■□□□ 1.46
PABPN1-206ENST00000556809 KRT13P13646 458 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 POLR2BP30876 1174 aaKnown RBP24.2■■□□□ 1.46
PABPN1-206ENST00000556809 CLDN10P78369 228 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 OTOP3Q7RTS5 596 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 USP37Q86T82 979 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 PLCD3Q8N3E9 789 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 CEP63Q96MT8 703 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 AFF4Q9UHB7 1163 aaKnown RBP24.2■■□□□ 1.46
PABPN1-206ENST00000556809 DACH1Q9UI36 760 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 SIX4Q9UIU6 781 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 MAFFQ9ULX9 164 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 AGAP1Q9UPQ3 857 aa24.2■■□□□ 1.46
PABPN1-206ENST00000556809 KPNA7A9QM74 516 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 CYB561D2O14569 222 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 CCL16O15467 120 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 VNN2O95498 520 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 PNPLA4P41247 253 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 VAMP7P51809 220 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 DLG4P78352 724 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 ENPEPQ07075 957 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 BFSP1Q12934 665 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 SV2CQ496J9 727 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 TRAPPC11Q7Z392 1133 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 CSGALNACT2Q8N6G5 542 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 LRRC52Q8N7C0 313 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 ZNF516Q92618 1163 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 ZNF560Q96MR9 790 aa24.19■■□□□ 1.46
PABPN1-206ENST00000556809 OR6C75A6NL08 312 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 KRT19P08727 400 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 AP3M2P53677 418 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 RBP5P82980 135 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 GPR17Q13304 367 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 PTPN21Q16825 1174 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 SASS6Q6UVJ0 657 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 RNF19BQ6ZMZ0 732 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 GRASPQ7Z6J2 395 aaPredicted RBP24.18■■□□□ 1.46
PABPN1-206ENST00000556809 EDAQ92838 391 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 ACSF2Q96CM8 615 aaPredicted RBP24.18■■□□□ 1.46
PABPN1-206ENST00000556809 RTP3Q9BQQ7 232 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 DSEQ9UL01 958 aa24.18■■□□□ 1.46
PABPN1-206ENST00000556809 IKBKBO14920 756 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 XYLBO75191 536 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 OR4Q2P0C623 313 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 CPB1P15086 417 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 ZXDAP98168 799 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 ADCY1Q08828 1119 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 FILIP1Q7Z7B0 1213 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 OR10T2Q8NGX3 314 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 MYADMQ96S97 322 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 CYP4F11Q9HBI6 524 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 DNMT3BQ9UBC3 853 aaKnown RBP24.17■■□□□ 1.46
PABPN1-206ENST00000556809 LIMD1Q9UGP4 676 aa24.17■■□□□ 1.46
PABPN1-206ENST00000556809 R3HCC1Q9Y3T6 440 aaKnown RBP24.17■■□□□ 1.46
PABPN1-206ENST00000556809 TRIOO75962 3097 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 TECTAO75443 2155 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 FAM86C2PA6NEL3 165 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 TRIM49P0CI25 452 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 TRIM49CP0CI26 452 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 ERCC5P28715 1186 aaPredicted RBP24.16■■□□□ 1.46
PABPN1-206ENST00000556809 ELF1P32519 619 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 MCCD1P59942 119 aaPredicted RBP24.16■■□□□ 1.46
PABPN1-206ENST00000556809 NTHL1P78549 312 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 TMEM31Q5JXX7 168 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 C1orf220Q5T0J3 134 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 WSCD1Q658N2 575 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 MED15Q96RN5 788 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 TMEM209Q96SK2 561 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 LRFN3Q9BTN0 628 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 HCFC1R1Q9NWW0 138 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 GDAP2Q9NXN4 497 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 EPS15L1Q9UBC2 864 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 INSL5Q9Y5Q6 135 aa24.16■■□□□ 1.46
PABPN1-206ENST00000556809 PRRG1O14668 218 aa24.15■■□□□ 1.46
PABPN1-206ENST00000556809 BIRC3Q13489 604 aa24.15■■□□□ 1.46
PABPN1-206ENST00000556809 SKOR2Q2VWA4 1001 aaPredicted RBP24.15■■□□□ 1.46
PABPN1-206ENST00000556809 CT47A1Q5JQC4 288 aaPredicted RBP24.15■■□□□ 1.46
PABPN1-206ENST00000556809 TDRD10Q5VZ19 366 aaKnown RBP24.15■■□□□ 1.46
PABPN1-206ENST00000556809 SRRTQ9BXP5 876 aaKnown RBP24.15■■□□□ 1.46
PABPN1-206ENST00000556809 CRISPLD1Q9H336 500 aa24.15■■□□□ 1.46
PABPN1-206ENST00000556809 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.15■■□□□ 1.463e-77■■■■■ 28.1
PABPN1-206ENST00000556809 ARMCX3Q9UH62 379 aaPredicted RBP24.15■■□□□ 1.46
PABPN1-206ENST00000556809 PHACTR2O75167 634 aa24.14■■□□□ 1.45
PABPN1-206ENST00000556809 FGFR1OPO95684 399 aaKnown RBP24.14■■□□□ 1.45
PABPN1-206ENST00000556809 C4BPAP04003 597 aaKnown RBP24.14■■□□□ 1.45
PABPN1-206ENST00000556809 ASGR2P07307 311 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms