RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 PDCL2Q8N4E4 241 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 ATAD1Q8NBU5 361 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 ZNF516Q92618 1163 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 EDAQ92838 391 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 TCEAL4Q96EI5 215 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 HPDLQ96IR7 371 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 MFSD14AQ96MC6 490 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 CORO1BQ9BR76 489 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 ZCWPW1Q9H0M4 648 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 TMLHEQ9NVH6 421 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 DMAC2Q9NW81 257 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 CHMP5Q9NZZ3 219 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 CEP72Q9P209 647 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 DSEQ9UL01 958 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 SORCS3Q9UPU3 1222 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 SNX9Q9Y5X1 595 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 KMT2EQ8IZD2 1858 aa11.16□□□□□ -0.62
SNX6-208ENST00000556712 OBSL1O75147 1896 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 COL4A3Q01955 1670 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 NARSO43776 548 aaKnown RBP11.15□□□□□ -0.62
SNX6-208ENST00000556712 CALUO43852 315 aaPredicted RBP11.15□□□□□ -0.62
SNX6-208ENST00000556712 GPR37L1O60883 481 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 CST3P01034 146 aaPredicted RBP11.15□□□□□ -0.62
SNX6-208ENST00000556712 RHOP08100 348 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 CEBPBP17676 345 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 PAX3P23760 479 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 NR2F2P24468 414 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 CCR2P41597 374 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 MTMR3Q13615 1198 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 SOWAHAQ2M3V2 549 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 TDRD10Q5VZ19 366 aaKnown RBP11.15□□□□□ -0.62
SNX6-208ENST00000556712 ISM2Q6H9L7 571 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 CENPPQ6IPU0 288 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 POTEHQ6S545 545 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 LRRTM3Q86VH5 581 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 SLC9A9Q8IVB4 645 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 ADGRF2Q8IZF7 708 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 THEM5Q8N1Q8 247 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
SNX6-208ENST00000556712 CCDC34Q96HJ3 373 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 SEPT5Q99719 369 aaPredicted RBP11.15□□□□□ -0.62
SNX6-208ENST00000556712 OXCT2Q9BYC2 517 aaPredicted RBP11.15□□□□□ -0.62
SNX6-208ENST00000556712 DNAJC25Q9H1X3 360 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 ABI2Q9NYB9 513 aaPredicted RBP11.15□□□□□ -0.62
SNX6-208ENST00000556712 EPS15L1Q9UBC2 864 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 TRAF3IP3Q9Y228 551 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 PCDHA5Q9Y5H7 936 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 PTPRDP23468 1912 aa11.15□□□□□ -0.62
SNX6-208ENST00000556712 TMEM221A6NGB7 291 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 M0R296 226 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 KINO60870 393 aaKnown RBP11.14□□□□□ -0.63
SNX6-208ENST00000556712 HUS1O60921 280 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 AKAP3O75969 853 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 CLSTN1O94985 981 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 KIF20AO95235 890 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 PDGFBP01127 241 aaPredicted RBP11.14□□□□□ -0.63
SNX6-208ENST00000556712 TRIM49P0CI25 452 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 TRIM49CP0CI26 452 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 LAMP2P13473 410 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 GJA1P17302 382 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 PTPN2P17706 415 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 MYL6P60660 151 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 PSMC1P62191 440 aaKnown RBP11.14□□□□□ -0.63
SNX6-208ENST00000556712 SIGLEC14Q08ET2 396 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 MYO1EQ12965 1108 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 BIRC3Q13489 604 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 HTR4Q13639 388 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 ZCWPW2Q504Y3 356 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 HFE2Q6ZVN8 426 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 RTL10Q7L3V2 364 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 NPAS3Q8IXF0 933 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 TOP6BLQ8N6T0 577 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 STKLD1Q8NE28 680 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 PARD3BQ8TEW8 1205 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 KBTBD7Q8WVZ9 684 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 FGF13Q92913 245 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 SMARCE1Q969G3 411 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 EEF2KMTQ96G04 330 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 LPIN3Q9BQK8 851 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 KCNK12Q9HB15 430 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 GDAP2Q9NXN4 497 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 DDX43Q9NXZ2 648 aaKnown RBP11.14□□□□□ -0.63
SNX6-208ENST00000556712 CDH7Q9ULB5 785 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 MRPS23Q9Y3D9 190 aaKnown RBP11.14□□□□□ -0.63
SNX6-208ENST00000556712 R3HCC1Q9Y3T6 440 aaKnown RBP11.14□□□□□ -0.63
SNX6-208ENST00000556712 NUMBLQ9Y6R0 609 aa11.14□□□□□ -0.63
SNX6-208ENST00000556712 TRIOO75962 3097 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 TRIM49BA6NDI0 452 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 PRR33A8MZF0 331 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 PRPF40AO75400 957 aaKnown RBP11.13□□□□□ -0.63
SNX6-208ENST00000556712 SMC2O95347 1197 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 VNN1O95497 513 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 MYL4P12829 197 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 ATF6P18850 670 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 COL9A1P20849 921 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 PRCPP42785 496 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
SNX6-208ENST00000556712 GPR15P49685 360 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms