RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 PFKFB3Q16875 520 aaPredicted RBP10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 MCTP2Q6DN12 878 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 ECHDC2Q86YB7 292 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 SMAP1Q8IYB5 467 aaPredicted RBP10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 SLFN12Q8IYM2 578 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 METTL13Q8N6R0 699 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 TCF25Q9BQ70 676 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 ATP13A1Q9HD20 1204 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 MYO10Q9HD67 2058 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 EVPLQ92817 2033 aa10.09□□□□□ -0.79
GTF2A1-204ENST00000556268 RIF1Q5UIP0 2472 aaKnown RBP10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 C2orf71A6NGG8 1288 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 CLASP2O75122 1294 aaKnown RBP10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 SRGAP2BP0DMP2 458 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 PPM1AP35813 382 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 ITIH3Q06033 890 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 TNK2Q07912 1038 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 CLLU1OSQ5K130 101 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 JAKMIP3Q5VZ66 844 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 EFCAB12Q6NXP0 572 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 UBALD2Q8IYN6 164 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 SLC39A11Q8N1S5 342 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 FBXL16Q8N461 479 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 LRRN4CLQ8ND94 238 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 LENG9Q96B70 501 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 ZNF558Q96NG5 402 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 CEP89Q96ST8 783 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 ZNF577Q9BSK1 485 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 BACH2Q9BYV9 841 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 NRBP2Q9NSY0 501 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 GABBR1Q9UBS5 961 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 CEP131Q9UPN4 1083 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 NR2E1Q9Y466 385 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 PLXNA4Q9HCM2 1894 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 CFAP54Q96N23 3096 aa10.08□□□□□ -0.8
GTF2A1-204ENST00000556268 KIAA1671Q9BY89 1806 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 CHURC1-FNTBB4DL54 471 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 PRPF3O43395 683 aaKnown RBP10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 STBD1O95210 358 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 DARSP14868 501 aaKnown RBP10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 ZSCAN20P17040 1043 aaPredicted RBP10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 IBSPP21815 317 aaPredicted RBP10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 TMOD1P28289 359 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 GPC3P51654 580 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 CLCN3P51790 818 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 CDC42EP1Q00587 391 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 TARBP2Q15633 366 aaKnown RBP10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 ADCK5Q3MIX3 580 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 PLPP4Q5VZY2 271 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 SLC23A3Q6PIS1 610 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 CKAP2LQ8IYA6 745 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 LRRC43Q8N309 656 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 KREMEN2Q8NCW0 462 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 CASP10Q92851 521 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 FAM167AQ96KS9 214 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 SNX27Q96L92 541 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 Q96M66 194 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 NECTIN4Q96NY8 510 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 BRMS1Q9HCU9 246 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 CHST12Q9NRB3 414 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 HCFC2Q9Y5Z7 792 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 IRAK3Q9Y616 596 aa10.07□□□□□ -0.8
GTF2A1-204ENST00000556268 MYO15AQ9UKN7 3530 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 DMDP11532 3685 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 IGKV6-21A0A0C4DH24 114 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 CCDC196A0A1B0GTZ2 297 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 ZNF623O75123 536 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 PAPLNO95428 1278 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 CXCL14O95715 111 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 PDGFBP01127 241 aaPredicted RBP10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 PBX3P40426 434 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 SETQ01105 290 aaPredicted RBP10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 SMC1AQ14683 1233 aaKnown RBP10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 B3GNT9Q6UX72 402 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 ZDHHC14Q8IZN3 488 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 SLC22A17Q8WUG5 538 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 RSPH1Q8WYR4 309 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 ATOH1Q92858 354 aaPredicted RBP10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 TCEANC2Q96MN5 208 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 PPP1R16BQ96T49 567 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 RIT2Q99578 217 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 POMKQ9H5K3 350 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 C6orf50Q9HD87 102 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 ENTPD7Q9NQZ7 604 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 UBP1Q9NZI7 540 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 SORCS3Q9UPU3 1222 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 RNF114Q9Y508 228 aa10.06□□□□□ -0.8
GTF2A1-204ENST00000556268 KLF18A0A0U1RQI7 1052 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 GOLGA8BA8MQT2 603 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 C2CD4DB7Z1M9 353 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 H0Y858 1186 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 JUNBP17275 347 aaPredicted RBP10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 GNA11P29992 359 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 MTHFRP42898 656 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 ALDH7A1P49419 539 aaKnown RBP10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 POLGP54098 1239 aaPredicted RBP10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 BCAR1P56945 870 aa10.05□□□□□ -0.8
GTF2A1-204ENST00000556268 NTRK3Q16288 839 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms