RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SUSD3Q96L08 255 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 CORO1BQ9BR76 489 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 FOXQ1Q9C009 403 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 HAPLN2Q9GZV7 340 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 RPF1Q9H9Y2 349 aaKnown RBP7.28□□□□□ -1.24
PSEN1-216ENST00000556066 PLEKHA5Q9HAU0 1116 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 PARVGQ9HBI0 331 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 FBXL5Q9UKA1 691 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 ODF2LQ9ULJ1 636 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 TBX20Q9UMR3 447 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 SIT1Q9Y3P8 196 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 TIMM13Q9Y5L4 95 aaPredicted RBP7.28□□□□□ -1.24
PSEN1-216ENST00000556066 COL4A3Q01955 1670 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 USP24Q9UPU5 2620 aa7.28□□□□□ -1.24
PSEN1-216ENST00000556066 ZNF638Q14966 1978 aaKnown RBP7.28□□□□□ -1.24
PSEN1-216ENST00000556066 TICRRQ7Z2Z1 1910 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 TTC26A0AVF1 554 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 ARHGEF37A1IGU5 675 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 LACTBL1A8MY62 500 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 OGTO15294 1046 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 SLC26A4O43511 780 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 ABLIM3O94929 683 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 SEC24AO95486 1093 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 ATF2P15336 505 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 CEBPBP17676 345 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 PTPN2P17706 415 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 PDCP20941 246 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 CTHP32929 405 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 YWHAHQ04917 246 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-216ENST00000556066 UBXN2BQ14CS0 331 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 ENOX2Q16206 610 aaKnown RBP7.27□□□□□ -1.25
PSEN1-216ENST00000556066 KYAT1Q16773 422 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 SLC5A9Q2M3M2 681 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 ZC2HC1CQ53FD0 456 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-216ENST00000556066 ZBTB41Q5SVQ8 909 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 TPGS2Q68CL5 300 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 IQCEQ6IPM2 695 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 DSTYKQ6XUX3 929 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 RTL10Q7L3V2 364 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 ERMP1Q7Z2K6 904 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 ELMOD1Q8N336 334 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 LARP4BQ92615 738 aaKnown RBP7.27□□□□□ -1.25
PSEN1-216ENST00000556066 NKD2Q969F2 451 aaPredicted RBP7.27□□□□□ -1.25
PSEN1-216ENST00000556066 SHDQ96IW2 340 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 EPSTI1Q96J88 318 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 MSTO1Q9BUK6 570 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 SLC2A4RGQ9NR83 387 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 BLOC1S4Q9NUP1 217 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 FKBPLQ9UIM3 349 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 KCNH3Q9ULD8 1083 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 UBQLN1Q9UMX0 589 aaKnown RBP7.27□□□□□ -1.25
PSEN1-216ENST00000556066 INSL5Q9Y5Q6 135 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 CLIC4Q9Y696 253 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 MAP1BP46821 2468 aaKnown RBP7.27□□□□□ -1.25
PSEN1-216ENST00000556066 F5P12259 2224 aa7.27□□□□□ -1.25
PSEN1-216ENST00000556066 TISP43B9A030 160 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 XPOTO43592 962 aaKnown RBP7.26□□□□□ -1.25
PSEN1-216ENST00000556066 TBC1D4O60343 1298 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 LRRN2O75325 713 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 POU2F2P09086 479 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 OR4Q2P0C623 313 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 MYL4P12829 197 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 CD72P21854 359 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 NMT1P30419 496 aaKnown RBP7.26□□□□□ -1.25
PSEN1-216ENST00000556066 ACOT2P49753 483 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 CDR1P51861 262 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 ZNF131P52739 623 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 PFKPQ01813 784 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 TWF1Q12792 350 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 MRPL58Q14197 206 aaKnown RBP7.26□□□□□ -1.25
PSEN1-216ENST00000556066 MLF2Q15773 248 aaPredicted RBP7.26□□□□□ -1.25
PSEN1-216ENST00000556066 SLC44A4Q53GD3 710 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 CYP4A22Q5TCH4 519 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 ADALQ6DHV7 355 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 TANGO2Q6ICL3 276 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 JADE1Q6IE81 842 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 PHLDB3Q6NSJ2 640 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 FAM173BQ6P4H8 233 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 USP49Q70CQ1 688 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 PDZD4Q76G19 769 aaPredicted RBP7.26□□□□□ -1.25
PSEN1-216ENST00000556066 DYMQ7RTS9 669 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 TCEAL8Q8IYN2 117 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 BEST2Q8NFU1 509 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 PJA1Q8NG27 643 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 KCNG4Q8TDN1 519 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 TCEAL4Q96EI5 215 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 ZNF512Q96ME7 567 aaPredicted RBP7.26□□□□□ -1.25
PSEN1-216ENST00000556066 PGLYRP2Q96PD5 576 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 PLA2G2FQ9BZM2 168 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 GDE1Q9NZC3 331 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 TBC1D7Q9P0N9 293 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 CCDC39Q9UFE4 941 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 AFF4Q9UHB7 1163 aaKnown RBP7.26□□□□□ -1.25
PSEN1-216ENST00000556066 FCF1Q9Y324 198 aaKnown RBP7.26□□□□□ -1.25
PSEN1-216ENST00000556066 R4GN57 208 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 FANCMQ8IYD8 2048 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 TSC2P49815 1807 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 PATJQ8NI35 1801 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 ZFYVE26Q68DK2 2539 aa7.26□□□□□ -1.25
PSEN1-216ENST00000556066 A0A0B4J269 797 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms