RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PDCL2Q8N4E4 241 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 DEFB123Q8N688 67 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 OR6B3Q8NGW1 331 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 LNX1Q8TBB1 728 aaPredicted RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 SEMA4DQ92854 862 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 JAKMIP2Q96AA8 810 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 TNIP3Q96KP6 325 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 FAM161BQ96MY7 647 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 CDCA3Q99618 268 aaPredicted RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 VN1R3Q9BXE9 311 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 NSUN3Q9H649 340 aaKnown RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 TLE6Q9H808 572 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 RXFP1Q9HBX9 757 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 RTN4Q9NQC3 1192 aaKnown RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 DDX43Q9NXZ2 648 aaKnown RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 FNIP2Q9P278 1114 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 MTRRQ9UBK8 725 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 DPP7Q9UHL4 492 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 L1RE1Q9UN81 338 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 TIMM13Q9Y5L4 95 aaPredicted RBP8.17□□□□□ -1.1
TDP1-214ENST00000556063 VWA8A3KMH1 1905 aa8.17□□□□□ -1.1
TDP1-214ENST00000556063 TNRC18O15417 2968 aaPredicted RBP8.16□□□□□ -1.1
TDP1-214ENST00000556063 A0A1B0GTH6 734 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 A0A1W2PQC6 194 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 C2orf71A6NGG8 1288 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 EPOPA6NHQ4 379 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 A8MXQ7 604 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 GABRDO14764 452 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 CSPG5O95196 566 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 SRGAP2BP0DMP2 458 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 CPB1P15086 417 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 IGFBP6P24592 240 aaPredicted RBP8.16□□□□□ -1.1
TDP1-214ENST00000556063 DNAJB1P25685 340 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 KLRC2P26717 231 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 PON1P27169 355 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 FXR1P51114 621 aaKnown RBP eCLIP8.16□□□□□ -1.1
TDP1-214ENST00000556063 PLCB2Q00722 1185 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 GCNT1Q02742 428 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 CUL2Q13617 745 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 MRPL58Q14197 206 aaKnown RBP8.16□□□□□ -1.1
TDP1-214ENST00000556063 SYCP1Q15431 976 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 NFE2Q16621 373 aaPredicted RBP8.16□□□□□ -1.1
TDP1-214ENST00000556063 SPOPLQ6IQ16 392 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 PRSS55Q6UWB4 352 aaPredicted RBP8.16□□□□□ -1.1
TDP1-214ENST00000556063 SCARA5Q6ZMJ2 495 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 LIMS2Q7Z4I7 341 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 UNC93AQ86WB7 457 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 DCP1BQ8IZD4 617 aaKnown RBP8.16□□□□□ -1.1
TDP1-214ENST00000556063 TMEM130Q8N3G9 435 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 NEK11Q8NG66 645 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 LMO3Q8TAP4 145 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 TATDN2Q93075 761 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 IQCDQ96DY2 449 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 B3GALT6Q96L58 329 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 ERGIC2Q96RQ1 377 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 ACBD6Q9BR61 282 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 LSM14BQ9BX40 385 aaKnown RBP8.16□□□□□ -1.1
TDP1-214ENST00000556063 NT5C1AQ9BXI3 368 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 BCO2Q9BYV7 579 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 SMYD3Q9H7B4 428 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 UBE2TQ9NPD8 197 aaPredicted RBP8.16□□□□□ -1.1
TDP1-214ENST00000556063 PLCB1Q9NQ66 1216 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.16□□□□□ -1.1
TDP1-214ENST00000556063 APEX2Q9UBZ4 518 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 FBXL5Q9UKA1 691 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 CDH9Q9ULB4 789 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 MAFFQ9ULX9 164 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 BARX2Q9UMQ3 279 aaPredicted RBP8.16□□□□□ -1.1
TDP1-214ENST00000556063 POLIQ9UNA4 740 aa8.16□□□□□ -1.1
TDP1-214ENST00000556063 BRWD1Q9NSI6 2320 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 ATP8B3O60423 1300 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 TEX28O15482 410 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 LILRB3O75022 631 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 GLUD1P00367 558 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 CNPP09543 421 aaKnown RBP8.15□□□□□ -1.1
TDP1-214ENST00000556063 WEE2P0C1S8 567 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 FOSL2P15408 326 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 SLC9A1P19634 815 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 ELF1P32519 619 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 OR1D2P34982 312 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 IRS1P35568 1242 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 ASPAP45381 313 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 ARPP19P56211 112 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 INCA1Q0VD86 236 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 KCNMA1Q12791 1236 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 CAMK1Q14012 370 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 RAB33AQ14088 237 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 NR1I3Q14994 352 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 TPGS2Q68CL5 300 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 SCARA3Q6AZY7 606 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 SLC8B1Q6J4K2 584 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 SARM1Q6SZW1 724 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 RTL10Q7L3V2 364 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 RRAGAQ7L523 313 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 APTXQ7Z2E3 356 aaKnown RBP8.15□□□□□ -1.1
TDP1-214ENST00000556063 GAS2L3Q86XJ1 694 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 FMNL3Q8IVF7 1028 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 C2orf15Q8WU43 125 aaKnown RBP8.15□□□□□ -1.1
TDP1-214ENST00000556063 AUTS2Q8WXX7 1259 aa8.15□□□□□ -1.1
TDP1-214ENST00000556063 KLHL5Q96PQ7 755 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms