RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 AP5Z1O43299 807 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 CXCL14O95715 111 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 ASS1P00966 412 aaKnown RBP8.12□□□□□ -1.11
PCNX4-211ENST00000555929 RB1P06400 928 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 PDGFRBP09619 1106 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 LINC00271P0C7V0 271 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 PON1P27169 355 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 MFAP3P55082 362 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 MCCD1P59942 119 aaPredicted RBP8.12□□□□□ -1.11
PCNX4-211ENST00000555929 KCNMA1Q12791 1236 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 RAPGEF1Q13905 1077 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 BMS1Q14692 1282 aaKnown RBP8.12□□□□□ -1.11
PCNX4-211ENST00000555929 NR1I3Q14994 352 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 ARHGAP44Q17R89 818 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 USP41Q3LFD5 358 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 PLPP4Q5VZY2 271 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 WSCD1Q658N2 575 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 GJB7Q6PEY0 223 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 TRIM65Q6PJ69 517 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 PRSS55Q6UWB4 352 aaPredicted RBP8.12□□□□□ -1.11
PCNX4-211ENST00000555929 DDX53Q86TM3 631 aaKnown RBP8.12□□□□□ -1.11
PCNX4-211ENST00000555929 GPIHBP1Q8IV16 184 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 ARHGEF19Q8IW93 802 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 DRC7Q8IY82 874 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 SPPL3Q8TCT6 385 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 GDPD5Q8WTR4 605 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 CPLX3Q8WVH0 158 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 POF1BQ8WVV4 589 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 SUSD3Q96L08 255 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 SAMD11Q96NU1 681 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 TTPALQ9BTX7 342 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 PLVAPQ9BX97 442 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 NIF3L1Q9GZT8 377 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 XYLT2Q9H1B5 865 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 ZNF576Q9H609 170 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 SMYD3Q9H7B4 428 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 L1RE1Q9UN81 338 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 COQ4Q9Y3A0 265 aa8.12□□□□□ -1.11
PCNX4-211ENST00000555929 ARIH1Q9Y4X5 557 aaPredicted RBP8.12□□□□□ -1.11
PCNX4-211ENST00000555929 RANBP2P49792 3224 aaKnown RBP8.12□□□□□ -1.11
PCNX4-211ENST00000555929 LAMA2P24043 3122 aaKnown RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 ARHGEF37A1IGU5 675 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 GTPBP10A4D1E9 387 aaKnown RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 EPOPA6NHQ4 379 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 A8MXQ7 604 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 H3BNC9 293 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 H7C4K7 107 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 TMEM189-UBE2V1I3L0A0 370 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 M0QZQ0 153 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 GRM6O15303 877 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 SOD2P04179 222 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 URODP06132 367 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 KRT5P13647 590 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 TRIM21P19474 475 aaKnown RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 PAX3P23760 479 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 ACAT1P24752 427 aaKnown RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 GNL1P36915 607 aaPredicted RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 GLUD2P49448 558 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 POLR2FP61218 127 aaKnown RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 PLCB3Q01970 1234 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 ORC1Q13415 861 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 CUL2Q13617 745 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 SOWAHAQ2M3V2 549 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 CTXN3Q4LDR2 81 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 ZNF394Q53GI3 561 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 RTP2Q5QGT7 225 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 ZNF697Q5TEC3 545 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 KLHDC7AQ5VTJ3 777 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 OVOS1Q6IE37 1185 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 PHLDB3Q6NSJ2 640 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 DPH6Q7L8W6 267 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 CACNA2D4Q7Z3S7 1137 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 ADGRF2Q8IZF7 708 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 THEM5Q8N1Q8 247 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 PDCL2Q8N4E4 241 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 TOP6BLQ8N6T0 577 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 LMO3Q8TAP4 145 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 KAT5Q92993 513 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 ARID3AQ99856 593 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 TCF25Q9BQ70 676 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 MRPL45Q9BRJ2 306 aaKnown RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 HERC2P3Q9BVR0 1158 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 VN1R3Q9BXE9 311 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 PRDM12Q9H4Q4 367 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 GRPEL1Q9HAV7 217 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 NLRC4Q9NPP4 1024 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 MRPL17Q9NRX2 175 aaKnown RBP8.11□□□□□ -1.11
PCNX4-211ENST00000555929 GDAP2Q9NXN4 497 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 APEX2Q9UBZ4 518 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 DNAJC12Q9UKB3 198 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 DSEQ9UL01 958 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 PCDHB4Q9Y5E5 795 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 PCDHGC5Q9Y5F6 944 aa8.11□□□□□ -1.11
PCNX4-211ENST00000555929 C5orf67F2Z3F1 127 aa8.1□□□□□ -1.11
PCNX4-211ENST00000555929 SYN3O14994 580 aa8.1□□□□□ -1.11
PCNX4-211ENST00000555929 HCRTO43612 131 aa8.1□□□□□ -1.11
PCNX4-211ENST00000555929 ADCY5O95622 1261 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms